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The map label for this gene is 116494876

Identifier: 116494876

GI number: 116494876

Start: 1378901

End: 1379743

Strand: Direct

Name: 116494876

Synonym: LSEI_1390

Alternate gene names: NA

Gene position: 1378901-1379743 (Clockwise)

Preceding gene: 116494874

Following gene: 116494877

Centisome position: 47.63

GC content: 46.98

Gene sequence:

>843_bases
ATGGCAAATATCAAGATCGTCACGGATTCTTCCGTTCAACTGACTCCAGAAGAGATCAGCCAACATAACATTACGGTTGT
ACCGCTGACCATTATGATTGATAATACCGTTTATATTGATGGCAAAACCATCACACGGGATGATTTTATGGATGAAATGG
CTGCGGCGCAAAATCTGCCCAAAACCTCGCAACCAGCTGTCGGTACGTTTGCCGATGTTTTCGACAAACTGACAGCAGAC
GGTAGCGAAGTTTTGGCAATTCATATGACTGAAACGATCAGCGGAACGGTGAATTCTTCGCGGCAAGCGGCTCAAATTGC
GAAAGGCAAAGTGACGGTGATTGACTCGCAGTTCACGGACCGAGCGATGGCTTTTCAGGTCTTAGTCGCTGCTGAAATGG
CCGAAGCCGGCAAAGATATGAAAACGATTCTTGATAAGCTTGAGCAAGTGCGGGACAACACGACACTGGTCCTTGGCGTA
ACGAATTTAGACAATTTGGTCAAAGGTGGCCGGCTTAGTCGTGTTTCAGGCTTAATTTCATCGTTTTTGAACATCAAGGT
CATTCTGCAACTGCAAAATGGCGAACTGAAAGCCTTACGCAAGGGTCGGGGGATGAAGACGATTAATAATTTCATCGCCG
AAACAATTGCTAAAATGGCCAAACTCAGCAACATCAAAAGTGTTGGTATTTCAACGGCCGGCGCTAAGGAATTAGGTGAA
GACATTGGTCGGCGCATCGCAGAAGTGCTACCGAGTGTCCCGATTCTGGTGCGACCGACTGATCCAGTCATTGCAACCCA
TACAGGGCCAGGTGCGTTTGCAATTACGTACTACGTTGATTAA

Upstream 100 bases:

>100_bases
TAATCTAGTTATGATAACTAGATAATATGTACTGACAATATTTCTGGACTTTGCTATAATGAGTTCGATAAACGAACCTA
ACAGAAAGCGTGGCTCAGAC

Downstream 100 bases:

>100_bases
TTTTTAATAAAATTTAACTGGCCGGCGGAAGCGCCGGCTTTTTTAAAGCACGAACACTTGTGGCTTGAAAACGCCGTATG
CACGGTTTCGGGCATGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MANIKIVTDSSVQLTPEEISQHNITVVPLTIMIDNTVYIDGKTITRDDFMDEMAAAQNLPKTSQPAVGTFADVFDKLTAD
GSEVLAIHMTETISGTVNSSRQAAQIAKGKVTVIDSQFTDRAMAFQVLVAAEMAEAGKDMKTILDKLEQVRDNTTLVLGV
TNLDNLVKGGRLSRVSGLISSFLNIKVILQLQNGELKALRKGRGMKTINNFIAETIAKMAKLSNIKSVGISTAGAKELGE
DIGRRIAEVLPSVPILVRPTDPVIATHTGPGAFAITYYVD

Sequences:

>Translated_280_residues
MANIKIVTDSSVQLTPEEISQHNITVVPLTIMIDNTVYIDGKTITRDDFMDEMAAAQNLPKTSQPAVGTFADVFDKLTAD
GSEVLAIHMTETISGTVNSSRQAAQIAKGKVTVIDSQFTDRAMAFQVLVAAEMAEAGKDMKTILDKLEQVRDNTTLVLGV
TNLDNLVKGGRLSRVSGLISSFLNIKVILQLQNGELKALRKGRGMKTINNFIAETIAKMAKLSNIKSVGISTAGAKELGE
DIGRRIAEVLPSVPILVRPTDPVIATHTGPGAFAITYYVD
>Mature_279_residues
ANIKIVTDSSVQLTPEEISQHNITVVPLTIMIDNTVYIDGKTITRDDFMDEMAAAQNLPKTSQPAVGTFADVFDKLTADG
SEVLAIHMTETISGTVNSSRQAAQIAKGKVTVIDSQFTDRAMAFQVLVAAEMAEAGKDMKTILDKLEQVRDNTTLVLGVT
NLDNLVKGGRLSRVSGLISSFLNIKVILQLQNGELKALRKGRGMKTINNFIAETIAKMAKLSNIKSVGISTAGAKELGED
IGRRIAEVLPSVPILVRPTDPVIATHTGPGAFAITYYVD

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 30086; Mature: 29955

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANIKIVTDSSVQLTPEEISQHNITVVPLTIMIDNTVYIDGKTITRDDFMDEMAAAQNLP
CCEEEEEECCCCEECHHHHCCCCEEEEEEEEEEECEEEECCCEECHHHHHHHHHHHHCCC
KTSQPAVGTFADVFDKLTADGSEVLAIHMTETISGTVNSSRQAAQIAKGKVTVIDSQFTD
CCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEHHCCCCCCCHHHHHHHCCEEEEEECCHHH
RAMAFQVLVAAEMAEAGKDMKTILDKLEQVRDNTTLVLGVTNLDNLVKGGRLSRVSGLIS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCHHHHHHHHH
SFLNIKVILQLQNGELKALRKGRGMKTINNFIAETIAKMAKLSNIKSVGISTAGAKELGE
HHCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHH
DIGRRIAEVLPSVPILVRPTDPVIATHTGPGAFAITYYVD
HHHHHHHHHCCCCCEEEECCCCEEEEECCCCEEEEEEEEC
>Mature Secondary Structure 
ANIKIVTDSSVQLTPEEISQHNITVVPLTIMIDNTVYIDGKTITRDDFMDEMAAAQNLP
CEEEEEECCCCEECHHHHCCCCEEEEEEEEEEECEEEECCCEECHHHHHHHHHHHHCCC
KTSQPAVGTFADVFDKLTADGSEVLAIHMTETISGTVNSSRQAAQIAKGKVTVIDSQFTD
CCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEHHCCCCCCCHHHHHHHCCEEEEEECCHHH
RAMAFQVLVAAEMAEAGKDMKTILDKLEQVRDNTTLVLGVTNLDNLVKGGRLSRVSGLIS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCHHHHHHHHH
SFLNIKVILQLQNGELKALRKGRGMKTINNFIAETIAKMAKLSNIKSVGISTAGAKELGE
HHCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHH
DIGRRIAEVLPSVPILVRPTDPVIATHTGPGAFAITYYVD
HHHHHHHHHCCCCCEEEECCCCEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11544234 [H]