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The map label for this gene is 116494863

Identifier: 116494863

GI number: 116494863

Start: 1365347

End: 1365967

Strand: Direct

Name: 116494863

Synonym: LSEI_1377

Alternate gene names: NA

Gene position: 1365347-1365967 (Clockwise)

Preceding gene: 116494862

Following gene: 116494864

Centisome position: 47.16

GC content: 45.73

Gene sequence:

>621_bases
ATGGCGGAAAAAGATGAACACCAACATGACAATGAGGATCACAAGCGCACCAATGGTGAGGATCCAAGTAAACCTTGGGA
AACGCTGTTTGACGATGATCGTGATGATCAAGGTAATTTGAGCCGCGTTGCCACCAAGAAAAAAAGGCAAGGAAGTTCAA
AATTGACCTGGATTTTAGCGATCTTGTTAATTCTTGTGGTTTTGGCACCAATTATTTATGTCAAAATTTCTGGTGATCAA
AGCCGCAATGGCGCTAACCTTTCTAATGATCGCGTTGTGATCCAAAGTACTAAAAAGAGCAGTAAAGTTTCAAAATCAAA
GAAATCATCGAAGGCTTCCAAAGCCTCGAAGACTTCAGTGGCCTCGTCACAGGCAGCGTCGACTCAGCCTAGTCAAGCAC
CAAGCGTTACTTCCCAACAAGAAGAACAGACCAGTGCATCAGCGCAGCCTAGCGAGCAAGCAAGTGCCAGCACGGCTGGC
AGTTCATATACCGTGCAAGCAGGCGATAACCTTTATCGAATCGCTGTCAATCATGGAATGACCTTAGATGAGTTGCTCCA
GATGAACGGTATGAGTGCGGGTTCCAGCATTGCACCGGGCACGGTTTTGAAAGTGAAATAA

Upstream 100 bases:

>100_bases
TTAGCTTCTTGGCAGGCAGTATTTCACCAAATCTTTAGATAACCGACGCCCTGACGCTGGTCAATATGATACAATAAGCG
CAGTAGTGAGGGGGATCGTG

Downstream 100 bases:

>100_bases
TCATGACACGACCCTGTTCTGCATGCGTATTGGCATGAGCAGGGTCGTGTGTTGTGGAGGAAAGTATGCAAATTGCGATC
GACGGCCCGGCCAGTGCCGG

Product: LysM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MAEKDEHQHDNEDHKRTNGEDPSKPWETLFDDDRDDQGNLSRVATKKKRQGSSKLTWILAILLILVVLAPIIYVKISGDQ
SRNGANLSNDRVVIQSTKKSSKVSKSKKSSKASKASKTSVASSQAASTQPSQAPSVTSQQEEQTSASAQPSEQASASTAG
SSYTVQAGDNLYRIAVNHGMTLDELLQMNGMSAGSSIAPGTVLKVK

Sequences:

>Translated_206_residues
MAEKDEHQHDNEDHKRTNGEDPSKPWETLFDDDRDDQGNLSRVATKKKRQGSSKLTWILAILLILVVLAPIIYVKISGDQ
SRNGANLSNDRVVIQSTKKSSKVSKSKKSSKASKASKTSVASSQAASTQPSQAPSVTSQQEEQTSASAQPSEQASASTAG
SSYTVQAGDNLYRIAVNHGMTLDELLQMNGMSAGSSIAPGTVLKVK
>Mature_205_residues
AEKDEHQHDNEDHKRTNGEDPSKPWETLFDDDRDDQGNLSRVATKKKRQGSSKLTWILAILLILVVLAPIIYVKISGDQS
RNGANLSNDRVVIQSTKKSSKVSKSKKSSKASKASKTSVASSQAASTQPSQAPSVTSQQEEQTSASAQPSEQASASTAGS
SYTVQAGDNLYRIAVNHGMTLDELLQMNGMSAGSSIAPGTVLKVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22045; Mature: 21913

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKDEHQHDNEDHKRTNGEDPSKPWETLFDDDRDDQGNLSRVATKKKRQGSSKLTWILA
CCCCCCCCCCCCHHHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
ILLILVVLAPIIYVKISGDQSRNGANLSNDRVVIQSTKKSSKVSKSKKSSKASKASKTSV
HHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
ASSQAASTQPSQAPSVTSQQEEQTSASAQPSEQASASTAGSSYTVQAGDNLYRIAVNHGM
HHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCEEEEEECCCC
TLDELLQMNGMSAGSSIAPGTVLKVK
CHHHHHHHCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
AEKDEHQHDNEDHKRTNGEDPSKPWETLFDDDRDDQGNLSRVATKKKRQGSSKLTWILA
CCCCCCCCCCCHHHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
ILLILVVLAPIIYVKISGDQSRNGANLSNDRVVIQSTKKSSKVSKSKKSSKASKASKTSV
HHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
ASSQAASTQPSQAPSVTSQQEEQTSASAQPSEQASASTAGSSYTVQAGDNLYRIAVNHGM
HHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCEEEEEECCCC
TLDELLQMNGMSAGSSIAPGTVLKVK
CHHHHHHHCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA