Click here to switch to the map view.

The map label for this gene is 116494811

Identifier: 116494811

GI number: 116494811

Start: 1306442

End: 1307944

Strand: Direct

Name: 116494811

Synonym: LSEI_1322

Alternate gene names: NA

Gene position: 1306442-1307944 (Clockwise)

Preceding gene: 116494810

Following gene: 116494812

Centisome position: 45.12

GC content: 50.63

Gene sequence:

>1503_bases
ATGTCAGCGGAAGCAGTCGTGACGACAGAACAATTCGAATATCTCAAACAAGAGAACGCGCTGCTTCGCGAACAAGTCGA
GTTCTTAATGCGGCGCCTGTACGGCACTAAGCGTGAAAGTCTCACTGACGGTCAGGTTGATCTCTTTGATCAAACCAAAA
CCTTTGTGGCGCCAACAGTTCCTGAACCAGAAGAGCAAGATGACAAACCTGCAAAACGTAAAAAACAAAAAGGCAGGAAA
GCAGCGCAACTGGCTCCTTTTCCTGAAGTGGCTGTGCACCACGAACTAACCGGAGCGGAACGCCAGTGCCCACATTGTGC
CGCTGAGATGCGTGAAATTGGGGCCACGGCGACCAGCCGCGAACCGGTTCGGGTTCCGGAACACGTTGAAGTCCACGTCC
ACTATCAGCACGCCTATGAATGTCGCCAGTGTTCCAATCAGTTAGATCACAGCGTCATCAAAAAGGCGATAGTGCCGAAG
CCGTTCATTCCTAACAGCTTTGCCTCACCAAGCATCCTAACCCAAACGATGATCGAAAAGTATCGTAAAAAGGTCCCAGC
CTATCGCCAGATAAAGGATTGGGGAGACTTGGGGCTCGAACTAACCCGCCAACAAATCACCAACTGGCACATTCGGGCTT
GTGACTATGGGTTAGGCAATCTCTACGAACTGATGCATCAAACACTGCTCAAACAAACCGTCGTCCACGCCGATGAAACC
AGCTATCGCGTGTTGGAAAGCGAGAAAGTAAACACCTATTTCTGGGTTTTCGCCTCTGGACGCGCGGAAGACGAGCAGAT
TATTCTCTATGAGCACGCCGATTCCCGCGCCACGGAAGTCCCGAAGAACTTCCTCAACGGGTATACACATTATCTCCAAA
CCGATGGCTATCAAGTGTACGACAAACTTGATCAGGTCACCCGAGTCGCCTGTCTTTCCCACATCCGACGTAAGTTCTTC
GAGGCCATGGGTAAACAGGGCAACACGCAAAGCGGTGCCAAGAAAGGTGTGACATATTGTGATCGCATGTTCAAGATGGA
GCGGCCATGGCGGTTATTAACCCCTGATCAGCGCTATCAAAAACGCCAAAGTCAACTGAAATCAACTATGTCCGATTTCT
TCACTTGGTGTGAAAGTGTCCACGCCTTACCGCAATCCAAATTCGGCCGCGCCATCGACTATGCACTCAGTCAACGCGAA
GCCATGGAAAATGTGTTGTTGGATGGCCGTTTGGAGCTTTCAAATAACCGCGTTGAGCGCGCCGTCAAGGAACTCGTTAT
CGGTCGCAAAAACTGGCTATTCTCCACGAGTTTCAAAGGGGCCCGGTCAAGCGGGATTATCTTGAGTGTCATGCGTTCGG
CTGAGGCCAACGGTCTCGACTGCCGCAAATACCTCGAATACTTATTTACTGAATTACCCAACCTTTCCGTTCCTGGCGAT
TCTAAAGCGCTGCAGGATTATTTACCATGGTCGTCGCAAGTCCGGGCAATCTGTGCAAGATAA

Upstream 100 bases:

>100_bases
TTGTCTGAAAGAAAGTCTTTTCTTGAAGCTGACGAAAAGGCTTTCTTTTCGTGTGGCCGCTTGATATACTTTTTTCAACC
ATTTTAACGGAGGGCGCGAG

Downstream 100 bases:

>100_bases
ACCTCAATAAAAGACAACGGCTTCGGCATTTCCTCAATCATAAGGGAATCCGAAGCCGTTTTAAATGTACCTCACAATCG
TGCGCTTACGGTGAGAGAGA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MSAEAVVTTEQFEYLKQENALLREQVEFLMRRLYGTKRESLTDGQVDLFDQTKTFVAPTVPEPEEQDDKPAKRKKQKGRK
AAQLAPFPEVAVHHELTGAERQCPHCAAEMREIGATATSREPVRVPEHVEVHVHYQHAYECRQCSNQLDHSVIKKAIVPK
PFIPNSFASPSILTQTMIEKYRKKVPAYRQIKDWGDLGLELTRQQITNWHIRACDYGLGNLYELMHQTLLKQTVVHADET
SYRVLESEKVNTYFWVFASGRAEDEQIILYEHADSRATEVPKNFLNGYTHYLQTDGYQVYDKLDQVTRVACLSHIRRKFF
EAMGKQGNTQSGAKKGVTYCDRMFKMERPWRLLTPDQRYQKRQSQLKSTMSDFFTWCESVHALPQSKFGRAIDYALSQRE
AMENVLLDGRLELSNNRVERAVKELVIGRKNWLFSTSFKGARSSGIILSVMRSAEANGLDCRKYLEYLFTELPNLSVPGD
SKALQDYLPWSSQVRAICAR

Sequences:

>Translated_500_residues
MSAEAVVTTEQFEYLKQENALLREQVEFLMRRLYGTKRESLTDGQVDLFDQTKTFVAPTVPEPEEQDDKPAKRKKQKGRK
AAQLAPFPEVAVHHELTGAERQCPHCAAEMREIGATATSREPVRVPEHVEVHVHYQHAYECRQCSNQLDHSVIKKAIVPK
PFIPNSFASPSILTQTMIEKYRKKVPAYRQIKDWGDLGLELTRQQITNWHIRACDYGLGNLYELMHQTLLKQTVVHADET
SYRVLESEKVNTYFWVFASGRAEDEQIILYEHADSRATEVPKNFLNGYTHYLQTDGYQVYDKLDQVTRVACLSHIRRKFF
EAMGKQGNTQSGAKKGVTYCDRMFKMERPWRLLTPDQRYQKRQSQLKSTMSDFFTWCESVHALPQSKFGRAIDYALSQRE
AMENVLLDGRLELSNNRVERAVKELVIGRKNWLFSTSFKGARSSGIILSVMRSAEANGLDCRKYLEYLFTELPNLSVPGD
SKALQDYLPWSSQVRAICAR
>Mature_499_residues
SAEAVVTTEQFEYLKQENALLREQVEFLMRRLYGTKRESLTDGQVDLFDQTKTFVAPTVPEPEEQDDKPAKRKKQKGRKA
AQLAPFPEVAVHHELTGAERQCPHCAAEMREIGATATSREPVRVPEHVEVHVHYQHAYECRQCSNQLDHSVIKKAIVPKP
FIPNSFASPSILTQTMIEKYRKKVPAYRQIKDWGDLGLELTRQQITNWHIRACDYGLGNLYELMHQTLLKQTVVHADETS
YRVLESEKVNTYFWVFASGRAEDEQIILYEHADSRATEVPKNFLNGYTHYLQTDGYQVYDKLDQVTRVACLSHIRRKFFE
AMGKQGNTQSGAKKGVTYCDRMFKMERPWRLLTPDQRYQKRQSQLKSTMSDFFTWCESVHALPQSKFGRAIDYALSQREA
MENVLLDGRLELSNNRVERAVKELVIGRKNWLFSTSFKGARSSGIILSVMRSAEANGLDCRKYLEYLFTELPNLSVPGDS
KALQDYLPWSSQVRAICAR

Specific function: Unknown

COG id: COG3436

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004291 [H]

Pfam domain/function: PF03050 Transposase_25 [H]

EC number: NA

Molecular weight: Translated: 57666; Mature: 57535

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEAVVTTEQFEYLKQENALLREQVEFLMRRLYGTKRESLTDGQVDLFDQTKTFVAPTV
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHCCHHHCCCCC
PEPEEQDDKPAKRKKQKGRKAAQLAPFPEVAVHHELTGAERQCPHCAAEMREIGATATSR
CCCCCCCCCHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCHHCCHHHHHHHHHHCCCCCCC
EPVRVPEHVEVHVHYQHAYECRQCSNQLDHSVIKKAIVPKPFIPNSFASPSILTQTMIEK
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
YRKKVPAYRQIKDWGDLGLELTRQQITNWHIRACDYGLGNLYELMHQTLLKQTVVHADET
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
SYRVLESEKVNTYFWVFASGRAEDEQIILYEHADSRATEVPKNFLNGYTHYLQTDGYQVY
HHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHH
DKLDQVTRVACLSHIRRKFFEAMGKQGNTQSGAKKGVTYCDRMFKMERPWRLLTPDQRYQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
KRQSQLKSTMSDFFTWCESVHALPQSKFGRAIDYALSQREAMENVLLDGRLELSNNRVER
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHH
AVKELVIGRKNWLFSTSFKGARSSGIILSVMRSAEANGLDCRKYLEYLFTELPNLSVPGD
HHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC
SKALQDYLPWSSQVRAICAR
HHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
SAEAVVTTEQFEYLKQENALLREQVEFLMRRLYGTKRESLTDGQVDLFDQTKTFVAPTV
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHCCHHHCCCCC
PEPEEQDDKPAKRKKQKGRKAAQLAPFPEVAVHHELTGAERQCPHCAAEMREIGATATSR
CCCCCCCCCHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCHHCCHHHHHHHHHHCCCCCCC
EPVRVPEHVEVHVHYQHAYECRQCSNQLDHSVIKKAIVPKPFIPNSFASPSILTQTMIEK
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
YRKKVPAYRQIKDWGDLGLELTRQQITNWHIRACDYGLGNLYELMHQTLLKQTVVHADET
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
SYRVLESEKVNTYFWVFASGRAEDEQIILYEHADSRATEVPKNFLNGYTHYLQTDGYQVY
HHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHH
DKLDQVTRVACLSHIRRKFFEAMGKQGNTQSGAKKGVTYCDRMFKMERPWRLLTPDQRYQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
KRQSQLKSTMSDFFTWCESVHALPQSKFGRAIDYALSQREAMENVLLDGRLELSNNRVER
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHH
AVKELVIGRKNWLFSTSFKGARSSGIILSVMRSAEANGLDCRKYLEYLFTELPNLSVPGD
HHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC
SKALQDYLPWSSQVRAICAR
HHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]