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The map label for this gene is 116494810

Identifier: 116494810

GI number: 116494810

Start: 1305988

End: 1306341

Strand: Direct

Name: 116494810

Synonym: LSEI_1321

Alternate gene names: NA

Gene position: 1305988-1306341 (Clockwise)

Preceding gene: 116494809

Following gene: 116494811

Centisome position: 45.11

GC content: 46.89

Gene sequence:

>354_bases
ATGATACCCGACCTGTCCAAAGCTAACATTTACATCATTTGCGGTCGCACCAATCTGCGAAAAGGCATTGATGGCTTGGC
GGCCTTGGTCACGGAGGAGTACAAGATGGATGTGTTCGACAATGCGTTATTCATCTTCTGTGGTACCCGTAAGGATCGTT
TCAAAGCACTGTATTGGACCAAAAGTGGTTTTCTGCTTTTATACAAGCGCTTTGAAAACGGCTATATGCAATGGCCGCGC
GATCGCAGTGAAATTCGCCGTTTGAATTATCGTCAAATGTCACGTCTGGTCAATGGTTTAGCCATTGAAGAACGCCGTAC
CATTCAGCCTGTAACCCCGGGGTATGTGTACTGA

Upstream 100 bases:

>100_bases
AAACTAGGAGCCAAAATTAAACTAAACGAAGCCGAAGTCCTTTTCTACAATGGTATCGATAAGTTGATGGCCCGGATTAT
TTTGCAGGAGTTGATGGCCC

Downstream 100 bases:

>100_bases
TTGTCTGAAAGAAAGTCTTTTCTTGAAGCTGACGAAAAGGCTTTCTTTTCGTGTGGCCGCTTGATATACTTTTTTCAACC
ATTTTAACGGAGGGCGCGAG

Product: transposase

Products: NA

Alternate protein names: Transposase; IS66 Orf2 Like; Transposase ORF_A; TnpB Protein; Transposase-Like Protein; Transposase Protein; Transposase Orf2 For Insertion Sequence Element; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Degenerate Transposase; Is66 Orf2 Family Protein; IS66 Family Element Orf2 Protein; Insertion Sequence Transposase Protein; Transposase Number 2 For Insertion Sequence; Transposase TnpB Protein

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MIPDLSKANIYIICGRTNLRKGIDGLAALVTEEYKMDVFDNALFIFCGTRKDRFKALYWTKSGFLLLYKRFENGYMQWPR
DRSEIRRLNYRQMSRLVNGLAIEERRTIQPVTPGYVY

Sequences:

>Translated_117_residues
MIPDLSKANIYIICGRTNLRKGIDGLAALVTEEYKMDVFDNALFIFCGTRKDRFKALYWTKSGFLLLYKRFENGYMQWPR
DRSEIRRLNYRQMSRLVNGLAIEERRTIQPVTPGYVY
>Mature_117_residues
MIPDLSKANIYIICGRTNLRKGIDGLAALVTEEYKMDVFDNALFIFCGTRKDRFKALYWTKSGFLLLYKRFENGYMQWPR
DRSEIRRLNYRQMSRLVNGLAIEERRTIQPVTPGYVY

Specific function: Unknown

COG id: COG3436

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13870; Mature: 13870

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPDLSKANIYIICGRTNLRKGIDGLAALVTEEYKMDVFDNALFIFCGTRKDRFKALYWT
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEE
KSGFLLLYKRFENGYMQWPRDRSEIRRLNYRQMSRLVNGLAIEERRTIQPVTPGYVY
CCCEEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIPDLSKANIYIICGRTNLRKGIDGLAALVTEEYKMDVFDNALFIFCGTRKDRFKALYWT
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEE
KSGFLLLYKRFENGYMQWPRDRSEIRRLNYRQMSRLVNGLAIEERRTIQPVTPGYVY
CCCEEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA