Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494781

Identifier: 116494781

GI number: 116494781

Start: 1269003

End: 1269344

Strand: Direct

Name: 116494781

Synonym: LSEI_1290

Alternate gene names: NA

Gene position: 1269003-1269344 (Clockwise)

Preceding gene: 116494780

Following gene: 116494782

Centisome position: 43.83

GC content: 41.52

Gene sequence:

>342_bases
ATGGCACTAGCAGCAACCGGATCCGCACAAGGCGATCCGAAAACCTATCAAATCGGGTCAACGTTGAAACGATTTACCTT
GATAGATTTAGGCTTTGTTCAAACTAAGAACGGCAATTTTCAACTGCAACGCTCGCTTGATCCAAATTCACCGTACACAA
CGGCAAACAAGCTGAAAATGACGGTGGCAAAGAATTTAGATAAGTTCCAGCTCGATGTCACAACGGGCAATGGTCTTAAA
GCGATTAACATTTTCAAAACCGATGCCACAAAAGAAAATGTCGAGCAATATCAATATTGGATCAATAATTTGATTGAGCG
CGGTGTGATTGAAGCAAAATAG

Upstream 100 bases:

>100_bases
GCTAAACTTATAAACAGTTAAGCGTGTTCCTCGCATGCGCTGAAATAAAAACAGTTTCACCACCTTTTTGCTGGTGAAAC
TGTTTAGGGGAGGTTTTTGT

Downstream 100 bases:

>100_bases
GATGTATGCCGCGCTTTAACATTAAGCTGCCACGATGTTGGCCTCAGGGAGGCTGACAGCTTAGCAGCTTTTTTGCTTTC
TTTTGATTAGATCAAACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MALAATGSAQGDPKTYQIGSTLKRFTLIDLGFVQTKNGNFQLQRSLDPNSPYTTANKLKMTVAKNLDKFQLDVTTGNGLK
AINIFKTDATKENVEQYQYWINNLIERGVIEAK

Sequences:

>Translated_113_residues
MALAATGSAQGDPKTYQIGSTLKRFTLIDLGFVQTKNGNFQLQRSLDPNSPYTTANKLKMTVAKNLDKFQLDVTTGNGLK
AINIFKTDATKENVEQYQYWINNLIERGVIEAK
>Mature_112_residues
ALAATGSAQGDPKTYQIGSTLKRFTLIDLGFVQTKNGNFQLQRSLDPNSPYTTANKLKMTVAKNLDKFQLDVTTGNGLKA
INIFKTDATKENVEQYQYWINNLIERGVIEAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12588; Mature: 12457

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAATGSAQGDPKTYQIGSTLKRFTLIDLGFVQTKNGNFQLQRSLDPNSPYTTANKLKM
CCEECCCCCCCCCCEEECCCHHHHHEEEECCEEEECCCCEEEEECCCCCCCCCCCHHEEE
TVAKNLDKFQLDVTTGNGLKAINIFKTDATKENVEQYQYWINNLIERGVIEAK
HHHCCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALAATGSAQGDPKTYQIGSTLKRFTLIDLGFVQTKNGNFQLQRSLDPNSPYTTANKLKM
CEECCCCCCCCCCEEECCCHHHHHEEEECCEEEECCCCEEEEECCCCCCCCCCCHHEEE
TVAKNLDKFQLDVTTGNGLKAINIFKTDATKENVEQYQYWINNLIERGVIEAK
HHHCCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA