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The map label for this gene is ylmH [H]

Identifier: 116494769

GI number: 116494769

Start: 1256079

End: 1256858

Strand: Direct

Name: ylmH [H]

Synonym: LSEI_1278

Alternate gene names: 116494769

Gene position: 1256079-1256858 (Clockwise)

Preceding gene: 116494768

Following gene: 116494770

Centisome position: 43.38

GC content: 48.33

Gene sequence:

>780_bases
ATGGATGCCATCTATCAGCATTTTCGAAAAGATGAAGCGGCACTGATCGACCATTTTGCGGAACTAATTGAAACCGCACG
AACGGAGTACCGGCCAGTGCTGACAGACTTTACAGATCCACGTCAACGGTTGATTGCAACCAGTTTAGTAAGCGCCGATG
ACGATATTAAGCTCGTACATTTTGGCGGGTATCCCCACGCTGAGCGGCAACGAATCATCTTTGCACCGAGCTATTTCTCA
GCAACGGCGGCTGATTTTGATATTCGGTTGTTACAGATCATTTATCCGGAGAAATTCGCCGAACTGCACCATAGTACAGT
GCAAGGCACCCTACTGAACGCAGGCCTTGATCGTGATGTTTTCGGTGACATCATCACGGATGGTGACATTTGGCAGTTCT
TTGTGGCCGCGCACATGCAGGATTGGGTCACAAGCAATGTTGATAAAATCGGGCGCGTGGGTGTTCATTTCACTGAACAT
CCGCTGGCGGATTATGTGACACCGGAAAATGACTGGGAGCCGCTCAATTTTTCAGTCAGTGCTTTACGCTTGGATACAGT
TGTGGCCCACGGCTTTAACATCTCGCGTCAACGTGCCAAAACCTTAATTCAAGGCGGTAAGGTGCGTCTTAACTTTGGTG
AATCGGATGCACCGGATGCTGAAATTGCAACATCAGATATTATCTCTGTTCGAGGGTTTGGCCGCTTGCGGCTTGATGAG
ATTCTTGGAGAGAGTAAAAAAGGTAAACTAAGGGTCTCAGCGGCCGTGATTCATAAGTAG

Upstream 100 bases:

>100_bases
TTCACCAATCCTAGCATTCTTTGTACTTTCACTTATTAAAATGGCTTGGACGAAATTATTTATCATGTTAGTCCAGAAGC
TTGTAATCGGGTGACAACTT

Downstream 100 bases:

>100_bases
TCACACCGCCGAGTTCAACAATTGTCCCAGAAAACGAATTGATGAGGAGGACTATCAATGGCTTTGAGTCCACTAGACAT
TCACAATAAAGAATTTAGCA

Product: cell division protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MDAIYQHFRKDEAALIDHFAELIETARTEYRPVLTDFTDPRQRLIATSLVSADDDIKLVHFGGYPHAERQRIIFAPSYFS
ATAADFDIRLLQIIYPEKFAELHHSTVQGTLLNAGLDRDVFGDIITDGDIWQFFVAAHMQDWVTSNVDKIGRVGVHFTEH
PLADYVTPENDWEPLNFSVSALRLDTVVAHGFNISRQRAKTLIQGGKVRLNFGESDAPDAEIATSDIISVRGFGRLRLDE
ILGESKKGKLRVSAAVIHK

Sequences:

>Translated_259_residues
MDAIYQHFRKDEAALIDHFAELIETARTEYRPVLTDFTDPRQRLIATSLVSADDDIKLVHFGGYPHAERQRIIFAPSYFS
ATAADFDIRLLQIIYPEKFAELHHSTVQGTLLNAGLDRDVFGDIITDGDIWQFFVAAHMQDWVTSNVDKIGRVGVHFTEH
PLADYVTPENDWEPLNFSVSALRLDTVVAHGFNISRQRAKTLIQGGKVRLNFGESDAPDAEIATSDIISVRGFGRLRLDE
ILGESKKGKLRVSAAVIHK
>Mature_259_residues
MDAIYQHFRKDEAALIDHFAELIETARTEYRPVLTDFTDPRQRLIATSLVSADDDIKLVHFGGYPHAERQRIIFAPSYFS
ATAADFDIRLLQIIYPEKFAELHHSTVQGTLLNAGLDRDVFGDIITDGDIWQFFVAAHMQDWVTSNVDKIGRVGVHFTEH
PLADYVTPENDWEPLNFSVSALRLDTVVAHGFNISRQRAKTLIQGGKVRLNFGESDAPDAEIATSDIISVRGFGRLRLDE
ILGESKKGKLRVSAAVIHK

Specific function: Unknown

COG id: COG2302

COG function: function code S; Uncharacterized conserved protein, contains S4-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 29132; Mature: 29132

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAIYQHFRKDEAALIDHFAELIETARTEYRPVLTDFTDPRQRLIATSLVSADDDIKLVH
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHCCCCCEEEEE
FGGYPHAERQRIIFAPSYFSATAADFDIRLLQIIYPEKFAELHHSTVQGTLLNAGLDRDV
ECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHH
FGDIITDGDIWQFFVAAHMQDWVTSNVDKIGRVGVHFTEHPLADYVTPENDWEPLNFSVS
HHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCEECCCCHHHCCCCCCCCCCCCCCHH
ALRLDTVVAHGFNISRQRAKTLIQGGKVRLNFGESDAPDAEIATSDIISVRGFGRLRLDE
HHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHEECCCCCEEHHH
ILGESKKGKLRVSAAVIHK
HHCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MDAIYQHFRKDEAALIDHFAELIETARTEYRPVLTDFTDPRQRLIATSLVSADDDIKLVH
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHCCCCCEEEEE
FGGYPHAERQRIIFAPSYFSATAADFDIRLLQIIYPEKFAELHHSTVQGTLLNAGLDRDV
ECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHH
FGDIITDGDIWQFFVAAHMQDWVTSNVDKIGRVGVHFTEHPLADYVTPENDWEPLNFSVS
HHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCEECCCCHHHCCCCCCCCCCCCCCHH
ALRLDTVVAHGFNISRQRAKTLIQGGKVRLNFGESDAPDAEIATSDIISVRGFGRLRLDE
HHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHEECCCCCEEHHH
ILGESKKGKLRVSAAVIHK
HHCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9045828; 9384377 [H]