| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is divIVA [H]
Identifier: 116494770
GI number: 116494770
Start: 1256916
End: 1257701
Strand: Direct
Name: divIVA [H]
Synonym: LSEI_1279
Alternate gene names: 116494770
Gene position: 1256916-1257701 (Clockwise)
Preceding gene: 116494769
Following gene: 116494771
Centisome position: 43.41
GC content: 47.33
Gene sequence:
>786_bases ATGGCTTTGAGTCCACTAGACATTCACAATAAAGAATTTAGCAGCAAAATGCGCGGCTATGATAAGGACGAGGTCAATGA CTTCCTTGCCCAGATCGTTAAAGATTATAGTAGCTTGATCAAGGACAACGAGGGCCTGAAAAAAGAATTGGCAGATGCCA AGGAAAAGGTTCAGTACTTCACGGATATGAAGGAAGCCTTGAATCAATCGATTATTGTCGCTCAGGAAAGTGCTGAAAAG GTTAAAAATAGCGCGCATCAGGAAGCTGATTTGATTAAGCAGCAGGCGCAGCAGGATGGTCAGGCTATTTTGAGCAAGGC CAAAGCAGATGCTGACCAGAAGTTGCATCAAGCTCAAGCTCAAACGGAACAAACCTTGCATGATGCCGCATTGAAACGTC AGAATATTTCTGTCCAAACTGAAGACCTCAAGCGACAAAGCCGGGTCTTCCGCCAACGTCTGCAAGTGATGTTGGAGTCA CAGCTTGAAGTTGTGAAGAGTCCAGAGTGGAAGGAATTGCTTTCCAGTTCACCTGAAGCTGCCGATACGACCGATCCGAG TCAAGATTCGCTTGACAATGCCCACGAGGGTTTCGTAAACTCAGAGGGAGCAGTTTCCGGCGCTGATGGTACCTATACTG AGATCATTTTCCCAGATGATCAAAGTGGCGCACCAGCCTCGCAAGCAGCAGCAGATACACCGGCTAGTTCGGCGGCGGCT GAGTCAGAATCGACAAATGACAGTACCAATGATTCTGAGTCTGCAACCGATCATGATGCTCAATAA
Upstream 100 bases:
>100_bases AAAAGGTAAACTAAGGGTCTCAGCGGCCGTGATTCATAAGTAGTCACACCGCCGAGTTCAACAATTGTCCCAGAAAACGA ATTGATGAGGAGGACTATCA
Downstream 100 bases:
>100_bases CGTATGAACACGCGTCGTTTGGTGGTTCCCTTTGCAGCGAGTCAGGAAGTAGGTGTGAGCCTGACAAGTACCGCTGAACG ATATCAGTTCACAGTTGTCC
Product: cell division initiation protein
Products: NA
Alternate protein names: Cell division initiation protein divIVA; Minicell-associated protein divIVA [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MALSPLDIHNKEFSSKMRGYDKDEVNDFLAQIVKDYSSLIKDNEGLKKELADAKEKVQYFTDMKEALNQSIIVAQESAEK VKNSAHQEADLIKQQAQQDGQAILSKAKADADQKLHQAQAQTEQTLHDAALKRQNISVQTEDLKRQSRVFRQRLQVMLES QLEVVKSPEWKELLSSSPEAADTTDPSQDSLDNAHEGFVNSEGAVSGADGTYTEIIFPDDQSGAPASQAAADTPASSAAA ESESTNDSTNDSESATDHDAQ
Sequences:
>Translated_261_residues MALSPLDIHNKEFSSKMRGYDKDEVNDFLAQIVKDYSSLIKDNEGLKKELADAKEKVQYFTDMKEALNQSIIVAQESAEK VKNSAHQEADLIKQQAQQDGQAILSKAKADADQKLHQAQAQTEQTLHDAALKRQNISVQTEDLKRQSRVFRQRLQVMLES QLEVVKSPEWKELLSSSPEAADTTDPSQDSLDNAHEGFVNSEGAVSGADGTYTEIIFPDDQSGAPASQAAADTPASSAAA ESESTNDSTNDSESATDHDAQ >Mature_260_residues ALSPLDIHNKEFSSKMRGYDKDEVNDFLAQIVKDYSSLIKDNEGLKKELADAKEKVQYFTDMKEALNQSIIVAQESAEKV KNSAHQEADLIKQQAQQDGQAILSKAKADADQKLHQAQAQTEQTLHDAALKRQNISVQTEDLKRQSRVFRQRLQVMLESQ LEVVKSPEWKELLSSSPEAADTTDPSQDSLDNAHEGFVNSEGAVSGADGTYTEIIFPDDQSGAPASQAAADTPASSAAAE SESTNDSTNDSESATDHDAQ
Specific function: May act as a pilot protein, directing minCD to the polar septation sites or by inhibiting minCD at the midcell site of division. Required for polar localization of the chromosome during sporulation [H]
COG id: COG3599
COG function: function code D; Cell division initiation protein
Gene ontology:
Cell location: Cytoplasm. Note=Localized at the cell division site and found exclusively at the cell pole during sporulation [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gpsB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007793 - InterPro: IPR019933 [H]
Pfam domain/function: PF05103 DivIVA [H]
EC number: NA
Molecular weight: Translated: 28528; Mature: 28397
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSPLDIHNKEFSSKMRGYDKDEVNDFLAQIVKDYSSLIKDNEGLKKELADAKEKVQYF CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH TDMKEALNQSIIVAQESAEKVKNSAHQEADLIKQQAQQDGQAILSKAKADADQKLHQAQA HHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTEQTLHDAALKRQNISVQTEDLKRQSRVFRQRLQVMLESQLEVVKSPEWKELLSSSPEA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC ADTTDPSQDSLDNAHEGFVNSEGAVSGADGTYTEIIFPDDQSGAPASQAAADTPASSAAA CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCHHHHH ESESTNDSTNDSESATDHDAQ CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALSPLDIHNKEFSSKMRGYDKDEVNDFLAQIVKDYSSLIKDNEGLKKELADAKEKVQYF CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH TDMKEALNQSIIVAQESAEKVKNSAHQEADLIKQQAQQDGQAILSKAKADADQKLHQAQA HHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTEQTLHDAALKRQNISVQTEDLKRQSRVFRQRLQVMLESQLEVVKSPEWKELLSSSPEA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC ADTTDPSQDSLDNAHEGFVNSEGAVSGADGTYTEIIFPDDQSGAPASQAAADTPASSAAA CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCHHHHH ESESTNDSTNDSESATDHDAQ CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9045828; 9219999; 9384377 [H]