Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494756

Identifier: 116494756

GI number: 116494756

Start: 1243806

End: 1244138

Strand: Direct

Name: 116494756

Synonym: LSEI_1265

Alternate gene names: NA

Gene position: 1243806-1244138 (Clockwise)

Preceding gene: 116494754

Following gene: 116494757

Centisome position: 42.96

GC content: 43.24

Gene sequence:

>333_bases
ATGGTGTTGCTTGCGATGGGTTTGCCCATTCTGGTATGGCTGGTCGTCGTTGCGGCTGTCGTTCAATTCGATTTTCATGG
CGGTTCGTGGTTTTGTTTACTCGCAATCGTTAATTTTTGGGCTATTTTTAAACTAACCTTTACCAAGACACCAAATTTTA
TTTGGGTCATTTTGTTTACCACGATGGTGATTGCCTTGATTTTGGTCATTTGGCAGGTGGTACGTGAATATGATCTGATC
GTTCGTCGATATTGGCGCATGTTGACCCGTGTTTTAGCCTTAGCCACCACATGTTGGTGGATGGCGGGTGTTTTAATCTT
TTTTCTGGGTTAA

Upstream 100 bases:

>100_bases
TTGCAAAGCTTGACGCTCCACGGAGCTTTGGTTAGGGTTAATTGAGAGATGTATCAATACGCGGCACCGAAGACGGTTGC
TGCTTTTGGAGGGAATCATC

Downstream 100 bases:

>100_bases
TTCCCCACTTTTCTCCCACAACTCATTATCGCCCGTGATCCTTGTGATCACGGGCTTTTTTTGTGCTCTTCAAAATGATT
AGCTTATTAAATAACCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MVLLAMGLPILVWLVVVAAVVQFDFHGGSWFCLLAIVNFWAIFKLTFTKTPNFIWVILFTTMVIALILVIWQVVREYDLI
VRRYWRMLTRVLALATTCWWMAGVLIFFLG

Sequences:

>Translated_110_residues
MVLLAMGLPILVWLVVVAAVVQFDFHGGSWFCLLAIVNFWAIFKLTFTKTPNFIWVILFTTMVIALILVIWQVVREYDLI
VRRYWRMLTRVLALATTCWWMAGVLIFFLG
>Mature_110_residues
MVLLAMGLPILVWLVVVAAVVQFDFHGGSWFCLLAIVNFWAIFKLTFTKTPNFIWVILFTTMVIALILVIWQVVREYDLI
VRRYWRMLTRVLALATTCWWMAGVLIFFLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12843; Mature: 12843

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLAMGLPILVWLVVVAAVVQFDFHGGSWFCLLAIVNFWAIFKLTFTKTPNFIWVILFT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
TMVIALILVIWQVVREYDLIVRRYWRMLTRVLALATTCWWMAGVLIFFLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLLAMGLPILVWLVVVAAVVQFDFHGGSWFCLLAIVNFWAIFKLTFTKTPNFIWVILFT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
TMVIALILVIWQVVREYDLIVRRYWRMLTRVLALATTCWWMAGVLIFFLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA