| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494741
Identifier: 116494741
GI number: 116494741
Start: 1227615
End: 1227767
Strand: Direct
Name: 116494741
Synonym: LSEI_1249
Alternate gene names: NA
Gene position: 1227615-1227767 (Clockwise)
Preceding gene: 116494740
Following gene: 116494742
Centisome position: 42.4
GC content: 39.87
Gene sequence:
>153_bases TTGCCTATTGATGATAGTGGTCATGGCAAACAACGGGCGTTTTTATTTAATAAAGGAAACATTTCACAAAAGCTGAGACT TTTGACGGTTTTCATCTTTTGGTTATCTGTGGTGATAAAGTCAGAAGCACAGATCAAACAGCCCGGTCGCTGA
Upstream 100 bases:
>100_bases CTGGCTGGCGTGAAGATTCAGGAGATCAAGTCATCGGATCAATTTATGAATCAAGATCAAGATGTTATTGCTGAATTACT TTAAAAAGAATGCCTGTTGT
Downstream 100 bases:
>100_bases CAGATAATATGATAACATCAGTACAATCCTAACGATTCATGCCAGTCATTACTTTTTAAAAAAGATAGCCAAGCAAGCCG AATTCTGGTAAGCTAATATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MPIDDSGHGKQRAFLFNKGNISQKLRLLTVFIFWLSVVIKSEAQIKQPGR
Sequences:
>Translated_50_residues MPIDDSGHGKQRAFLFNKGNISQKLRLLTVFIFWLSVVIKSEAQIKQPGR >Mature_49_residues PIDDSGHGKQRAFLFNKGNISQKLRLLTVFIFWLSVVIKSEAQIKQPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5714; Mature: 5583
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDDSGHGKQRAFLFNKGNISQKLRLLTVFIFWLSVVIKSEAQIKQPGR CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PIDDSGHGKQRAFLFNKGNISQKLRLLTVFIFWLSVVIKSEAQIKQPGR CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA