| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is hisK [H]
Identifier: 116494700
GI number: 116494700
Start: 1187004
End: 1187816
Strand: Direct
Name: hisK [H]
Synonym: LSEI_1206
Alternate gene names: 116494700
Gene position: 1187004-1187816 (Clockwise)
Preceding gene: 116494699
Following gene: 116494704
Centisome position: 41.0
GC content: 46.86
Gene sequence:
>813_bases GTGACAATTTATGATCAGCACATGCATACCTTGTATTCATTTGATTCCGAAGCCCAACTCCGTGATTACTTAACGCAGAC AAAGGCGCCTGTCGTGACAACAGAACATTTAGAGTTTGATAATCCTGATGATGGCGGCCGGGATAATCTGCCTGATTATG CTAGGATGAAGGCAACGCAGGCGGCTCTGGCCGAAAAATTTCCGAACGAATTCTTGCTTGGGATCGAAGCTGGCTATTTT GCTCCTGCCGATGCTCGATTCCGACAGTACTTGGACAACCATGACTTTGATTTGACACTTTTGAGTTTTCATCATGATGG TCATTACGATTATCTGGATGAGCAATTGATCACCATGCCAGCTAAACAGCAGCTTGAAGATTACTTTGAACGGATGCTCG CTGGCCTCAAACGATTTCATGATGCCGACGTCTTGGCACACTTTGACTATGCCTTGCGCCGATTTGACATCACACCGGAC CAGCTAGAAGCTTGGGGCAAGCCGTTGTTGGATCAAATTTTTACCATTGCCGTCGAAAATGACTTGGCGTTGGAGTTGAA TACGAAGTCAATGTATCGCTGGGGCAATGCACCACTGTATGATCAGGCGATTGCTTGGTATCAAGCAGCGGGTGGTCACT TGTTTACTATTGGCAGTGATGCGCATGAAGGACCGCAATACGAGGCAAACTTTGCTGATGCGCTAGCGATGCTTAAACGT CACGGGGTAAAAGAAATCGCCACGTATCGTCAACATCAGCGGACAATGGTACCGATTGAGCCGCCAGTGATTGATGCTGA TAATGCTTATTAA
Upstream 100 bases:
>100_bases ATATGCTTATGGTATAAGAAGTCATGGTTCGAAACCCTAACTAGCATTGGTTGTCAGTAGGGTAAAGGACACTGACCCCA CTAGAAGGAGGAACTCATTC
Downstream 100 bases:
>100_bases TTCGGCCGAGCCCCATCTGACCTATGATTGATCCGCCTTGGCACTGACGTCTTTAAGTCGCAGTGATTTGTTTAGACGAA ATAAAAAGCGAACAATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: HolPase [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTIYDQHMHTLYSFDSEAQLRDYLTQTKAPVVTTEHLEFDNPDDGGRDNLPDYARMKATQAALAEKFPNEFLLGIEAGYF APADARFRQYLDNHDFDLTLLSFHHDGHYDYLDEQLITMPAKQQLEDYFERMLAGLKRFHDADVLAHFDYALRRFDITPD QLEAWGKPLLDQIFTIAVENDLALELNTKSMYRWGNAPLYDQAIAWYQAAGGHLFTIGSDAHEGPQYEANFADALAMLKR HGVKEIATYRQHQRTMVPIEPPVIDADNAY
Sequences:
>Translated_270_residues MTIYDQHMHTLYSFDSEAQLRDYLTQTKAPVVTTEHLEFDNPDDGGRDNLPDYARMKATQAALAEKFPNEFLLGIEAGYF APADARFRQYLDNHDFDLTLLSFHHDGHYDYLDEQLITMPAKQQLEDYFERMLAGLKRFHDADVLAHFDYALRRFDITPD QLEAWGKPLLDQIFTIAVENDLALELNTKSMYRWGNAPLYDQAIAWYQAAGGHLFTIGSDAHEGPQYEANFADALAMLKR HGVKEIATYRQHQRTMVPIEPPVIDADNAY >Mature_269_residues TIYDQHMHTLYSFDSEAQLRDYLTQTKAPVVTTEHLEFDNPDDGGRDNLPDYARMKATQAALAEKFPNEFLLGIEAGYFA PADARFRQYLDNHDFDLTLLSFHHDGHYDYLDEQLITMPAKQQLEDYFERMLAGLKRFHDADVLAHFDYALRRFDITPDQ LEAWGKPLLDQIFTIAVENDLALELNTKSMYRWGNAPLYDQAIAWYQAAGGHLFTIGSDAHEGPQYEANFADALAMLKRH GVKEIATYRQHQRTMVPIEPPVIDADNAY
Specific function: Unknown
COG id: COG1387
COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHP hydrolase family. HisK subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010140 - InterPro: IPR004013 - InterPro: IPR016195 [H]
Pfam domain/function: PF02811 PHP [H]
EC number: =3.1.3.15 [H]
Molecular weight: Translated: 31100; Mature: 30969
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYDQHMHTLYSFDSEAQLRDYLTQTKAPVVTTEHLEFDNPDDGGRDNLPDYARMKATQ CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH AALAEKFPNEFLLGIEAGYFAPADARFRQYLDNHDFDLTLLSFHHDGHYDYLDEQLITMP HHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCC AKQQLEDYFERMLAGLKRFHDADVLAHFDYALRRFDITPDQLEAWGKPLLDQIFTIAVEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHEECC DLALELNTKSMYRWGNAPLYDQAIAWYQAAGGHLFTIGSDAHEGPQYEANFADALAMLKR CEEEEECCHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH HGVKEIATYRQHQRTMVPIEPPVIDADNAY CCHHHHHHHHHHCCEECCCCCCCCCCCCCC >Mature Secondary Structure TIYDQHMHTLYSFDSEAQLRDYLTQTKAPVVTTEHLEFDNPDDGGRDNLPDYARMKATQ CCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH AALAEKFPNEFLLGIEAGYFAPADARFRQYLDNHDFDLTLLSFHHDGHYDYLDEQLITMP HHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCC AKQQLEDYFERMLAGLKRFHDADVLAHFDYALRRFDITPDQLEAWGKPLLDQIFTIAVEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHEECC DLALELNTKSMYRWGNAPLYDQAIAWYQAAGGHLFTIGSDAHEGPQYEANFADALAMLKR CEEEEECCHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH HGVKEIATYRQHQRTMVPIEPPVIDADNAY CCHHHHHHHHHHCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]