Click here to switch to the map view.

The map label for this gene is cap4C [H]

Identifier: 116494594

GI number: 116494594

Start: 1077569

End: 1078483

Strand: Direct

Name: cap4C [H]

Synonym: LSEI_1093

Alternate gene names: 116494594

Gene position: 1077569-1078483 (Clockwise)

Preceding gene: 116494593

Following gene: 116494595

Centisome position: 37.22

GC content: 46.12

Gene sequence:

>915_bases
GTGAAAGTTCGTAAAGCAGTCATTCCGGCAGCCGGGCTTGGGACCCGCTTTCTGCCAGCAACTAAAGCTTTAGCCAAAGA
GATGTTACCAATCGTTGATAAACCAACCATTCAGTTCATCGTTGAAGAGGCTAAGGCCAGCGGGATTGAAGACATTCTGA
TCGTTGAGGGTAAACAAAAACGTTCTATTGAGGACCATTTCGATTCTGCTCCTGAATTGGAACAGAATTTGAAAGAAAAA
CATAAAGATGCCTTGTTGGAGTTGGTTCACTCCACTACTGACATCGGCGTTAATCTCTTCTTCGTTCGCCAGCCATATCC
GCGCGGCCTTGGGGATGCCGTTCGTTTGGCGAAGTCATTCGTTGGCGACGAACCATTTGTTGTCATGCTCGGCGATGACC
TGATGCATGACAAGGTACCGTTGACCAAGCAACTGATTAACGAATACGATAAGACCCACGCATCCATTCTTGCTGTTAAA
AAAGTGCCACATGACGAAGTTTCAGCTTATGGCGTTATTGACCCTGAAAAAGAAGTTTCAAAGGGACTCTTCAACGTCAA
GAAATTTGTTGAAAAGCCAGCTGTTGCCGATGCACCAAGTGACTTGGCCATCATTGGTCGTTACTTGTTGACACCAGAGA
TCTTTGATATTCTCGAAAATCAAAAACCTGGTAAGGGTAACGAAATTCAACTCACCGATGCCATCGACACCTTGAACCAA
ACCCAGCGTGTCTTCGCCCATGAATTCAACGGCGATCGTTATGACGTTGGGAATAAGTTTGGCTATGTGAAGACCAACAT
CGAGTACGGCTTGACCCACCCAGAAGTGAAGGATGAGCTGCGTGCTTATATTCTTGACTTGGCGTCAAAACTGCAGGCAA
ATAAGCCTGTGGGGAAGCCGGCAAATAAGAAGTAA

Upstream 100 bases:

>100_bases
ATTCTTTGTTAGAATTCAGGATTTCCAATACTTTTCGCAAGCGGTTTCTAGTATAGTATAGTAGGTAGTCAAATTAGTAA
GAGAAGGGACTTGTGTACAC

Downstream 100 bases:

>100_bases
ATTCATAACATAAAAGTTCAACTGTCAATAACAGAGCTGTTTGACGATACACAGATGAGTGTTCGATCAGACAGCTCTGT
TTGTTCGCGCTTAGGACGCA

Product: UDP-glucose pyrophosphorylase

Products: NA

Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEAKASGIEDILIVEGKQKRSIEDHFDSAPELEQNLKEK
HKDALLELVHSTTDIGVNLFFVRQPYPRGLGDAVRLAKSFVGDEPFVVMLGDDLMHDKVPLTKQLINEYDKTHASILAVK
KVPHDEVSAYGVIDPEKEVSKGLFNVKKFVEKPAVADAPSDLAIIGRYLLTPEIFDILENQKPGKGNEIQLTDAIDTLNQ
TQRVFAHEFNGDRYDVGNKFGYVKTNIEYGLTHPEVKDELRAYILDLASKLQANKPVGKPANKK

Sequences:

>Translated_304_residues
MKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEAKASGIEDILIVEGKQKRSIEDHFDSAPELEQNLKEK
HKDALLELVHSTTDIGVNLFFVRQPYPRGLGDAVRLAKSFVGDEPFVVMLGDDLMHDKVPLTKQLINEYDKTHASILAVK
KVPHDEVSAYGVIDPEKEVSKGLFNVKKFVEKPAVADAPSDLAIIGRYLLTPEIFDILENQKPGKGNEIQLTDAIDTLNQ
TQRVFAHEFNGDRYDVGNKFGYVKTNIEYGLTHPEVKDELRAYILDLASKLQANKPVGKPANKK
>Mature_304_residues
MKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEAKASGIEDILIVEGKQKRSIEDHFDSAPELEQNLKEK
HKDALLELVHSTTDIGVNLFFVRQPYPRGLGDAVRLAKSFVGDEPFVVMLGDDLMHDKVPLTKQLINEYDKTHASILAVK
KVPHDEVSAYGVIDPEKEVSKGLFNVKKFVEKPAVADAPSDLAIIGRYLLTPEIFDILENQKPGKGNEIQLTDAIDTLNQ
TQRVFAHEFNGDRYDVGNKFGYVKTNIEYGLTHPEVKDELRAYILDLASKLQANKPVGKPANKK

Specific function: May Play A Role In Stationary Phase Survival. [C]

COG id: COG1210

COG function: function code M; UDP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDPGP type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787488, Length=293, Percent_Identity=45.0511945392491, Blast_Score=231, Evalue=6e-62,
Organism=Escherichia coli, GI1788355, Length=284, Percent_Identity=44.0140845070423, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1788351, Length=235, Percent_Identity=28.936170212766, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790224, Length=238, Percent_Identity=26.0504201680672, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005771
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.9 [H]

Molecular weight: Translated: 33819; Mature: 33819

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEAKASGIEDILIVEGKQK
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCHH
RSIEDHFDSAPELEQNLKEKHKDALLELVHSTTDIGVNLFFVRQPYPRGLGDAVRLAKSF
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHH
VGDEPFVVMLGDDLMHDKVPLTKQLINEYDKTHASILAVKKVPHDEVSAYGVIDPEKEVS
CCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHH
KGLFNVKKFVEKPAVADAPSDLAIIGRYLLTPEIFDILENQKPGKGNEIQLTDAIDTLNQ
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEHHHHHHHHH
TQRVFAHEFNGDRYDVGNKFGYVKTNIEYGLTHPEVKDELRAYILDLASKLQANKPVGKP
HHHHHHHHCCCCEEECCCCCCEEEECCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
ANKK
CCCC
>Mature Secondary Structure
MKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEAKASGIEDILIVEGKQK
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCHH
RSIEDHFDSAPELEQNLKEKHKDALLELVHSTTDIGVNLFFVRQPYPRGLGDAVRLAKSF
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHH
VGDEPFVVMLGDDLMHDKVPLTKQLINEYDKTHASILAVKKVPHDEVSAYGVIDPEKEVS
CCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHH
KGLFNVKKFVEKPAVADAPSDLAIIGRYLLTPEIFDILENQKPGKGNEIQLTDAIDTLNQ
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEHHHHHHHHH
TQRVFAHEFNGDRYDVGNKFGYVKTNIEYGLTHPEVKDELRAYILDLASKLQANKPVGKP
HHHHHHHHCCCCEEECCCCCCEEEECCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
ANKK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]