Click here to switch to the map view.

The map label for this gene is yebQ [H]

Identifier: 116494568

GI number: 116494568

Start: 1052227

End: 1053651

Strand: Direct

Name: yebQ [H]

Synonym: LSEI_1066

Alternate gene names: 116494568

Gene position: 1052227-1053651 (Clockwise)

Preceding gene: 116494567

Following gene: 116494570

Centisome position: 36.34

GC content: 51.16

Gene sequence:

>1425_bases
ATGATCACCATGAGCGCCAGCCGTCGTTGGTTGATTTTGATTGCAACTTCAATTGTGTCCTTCATGGCTACATTGGATGC
CAGCATCGTCAATATTGCTTTGCCTTACATTGCCCGGGAGCTGAAGGTGCCGATGAGCACCGTCGAACTTGTCACATCAG
TTTATATGATCGCGATTTGTGTCCTGCTTATTTTCTGGGGAAAGTTGTCTGACAGCGTGGGTCGGATCTGGTTGTTTCAG
TTGGGGACCATTTTGTTTGCACTAGGCTCGCTTTTTTGCGGACTATCCATGACCTTACCATGGTTATTAACGGCCCGACT
GATTCAAGCCACTGGTGCCGCGATGACGATGGCGACTAATTTTGGCATTATCACCGCCATTTTTCCGATGAATCAGCATG
GTCGCGCGCTCGGGGTCAACAGTGCCTTGTTGCAACTCGGCAATATCGCTGGTCCCGGTATTGGCGGCGGGGTGTTGGCG
GTTTTAAGCTGGCATTGGATCTTTTTGATTAATGTGCCGGTTGCGCTGGTGGCGTTTTTAATTGGCGTGCTGGTTTTTCC
AAGGCAGCGGCCGTCCTTGGCGGGGGCCCACATGGATTGGCCGGGATATGGCAGTTATTCGGTAATCATTTTGGGCTTTT
TCATCACGGTGTTCTGGGCACAAACAGCCGGACTGTCGTGGGTGACGCTGTTACCAGGGATGCTTGCGTTCGTCGCTCTT
GTGGCTTTTGTGCAGATTGAGCGATATGCATCTGATCCGCTGATTCCATTTGCCATTTTCAAAAATCCGGGTTTCACGAT
TGGTATTCTGACTGCGATGATCGTCTATATGCTCGGCTATTTTAATAGCGTGATCATGCCGTTTTATCTGGAAGAAACAT
TAGGCTTGAGTGCGTTAACGGCGGGCTTTTGTATGATGGCAATTCCGGCGGCCAATGTTATCAGTGCGCCAATTGGCGGG
AATCTGGGCGATCATTCCGGAGCAGAACGGGTGTCTTTCTTCGCGCTGTTTCTCTGGTGTGTGCCGATGGGGTTGTTTGC
CGCGGTAACCCCGAACTGGCCGTTGGGTTGGATCGTGTTTGGCCTCGCGTGGTCAGGATTGGCCAATGGCGCTTTTCAAA
ACAATCCGATGATGATGGACAATGTCGCGCCGAGGTTTCAAGGACTGGCGGGGTCCATGGCCGCACTTGGCCGTAATTTG
GGGATGACAATAGGTGTTGCCTTGGTGACAAGCTTGTTGTACCTGAATATGAGTACGCAGGCCGGTCGGTACATTCATGA
TTATCCGCATGGCCATCCCCAGTGGTTTATCTATGGCATGCACCGCAGCTATGATTTTGCTCTGTTACTCTTATTGCTAG
CTGTGCTGCTGCTAGGCTGGTTGAACCTGCATCGGCTGCACGAGCGTAAACAGTCGTTAAGTTGA

Upstream 100 bases:

>100_bases
TAAATAAAACCGATATTAGTAGGCCTATCTTGTGCCTGAAATCGCCTCATAACGCTGTGTGTCAGTTATTAGTTGTCTTT
AAATCTAAAATGAAACTGAG

Downstream 100 bases:

>100_bases
AAATTAAAAAAAGAGACAAGTTCTGCGACCGATTATCAGGCGAAAACGCATGGTAAATAGCCGAAAACTTGTCTCTTTTT
TCAGATTAATCTTTGCCAGC

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MITMSASRRWLILIATSIVSFMATLDASIVNIALPYIARELKVPMSTVELVTSVYMIAICVLLIFWGKLSDSVGRIWLFQ
LGTILFALGSLFCGLSMTLPWLLTARLIQATGAAMTMATNFGIITAIFPMNQHGRALGVNSALLQLGNIAGPGIGGGVLA
VLSWHWIFLINVPVALVAFLIGVLVFPRQRPSLAGAHMDWPGYGSYSVIILGFFITVFWAQTAGLSWVTLLPGMLAFVAL
VAFVQIERYASDPLIPFAIFKNPGFTIGILTAMIVYMLGYFNSVIMPFYLEETLGLSALTAGFCMMAIPAANVISAPIGG
NLGDHSGAERVSFFALFLWCVPMGLFAAVTPNWPLGWIVFGLAWSGLANGAFQNNPMMMDNVAPRFQGLAGSMAALGRNL
GMTIGVALVTSLLYLNMSTQAGRYIHDYPHGHPQWFIYGMHRSYDFALLLLLLAVLLLGWLNLHRLHERKQSLS

Sequences:

>Translated_474_residues
MITMSASRRWLILIATSIVSFMATLDASIVNIALPYIARELKVPMSTVELVTSVYMIAICVLLIFWGKLSDSVGRIWLFQ
LGTILFALGSLFCGLSMTLPWLLTARLIQATGAAMTMATNFGIITAIFPMNQHGRALGVNSALLQLGNIAGPGIGGGVLA
VLSWHWIFLINVPVALVAFLIGVLVFPRQRPSLAGAHMDWPGYGSYSVIILGFFITVFWAQTAGLSWVTLLPGMLAFVAL
VAFVQIERYASDPLIPFAIFKNPGFTIGILTAMIVYMLGYFNSVIMPFYLEETLGLSALTAGFCMMAIPAANVISAPIGG
NLGDHSGAERVSFFALFLWCVPMGLFAAVTPNWPLGWIVFGLAWSGLANGAFQNNPMMMDNVAPRFQGLAGSMAALGRNL
GMTIGVALVTSLLYLNMSTQAGRYIHDYPHGHPQWFIYGMHRSYDFALLLLLLAVLLLGWLNLHRLHERKQSLS
>Mature_474_residues
MITMSASRRWLILIATSIVSFMATLDASIVNIALPYIARELKVPMSTVELVTSVYMIAICVLLIFWGKLSDSVGRIWLFQ
LGTILFALGSLFCGLSMTLPWLLTARLIQATGAAMTMATNFGIITAIFPMNQHGRALGVNSALLQLGNIAGPGIGGGVLA
VLSWHWIFLINVPVALVAFLIGVLVFPRQRPSLAGAHMDWPGYGSYSVIILGFFITVFWAQTAGLSWVTLLPGMLAFVAL
VAFVQIERYASDPLIPFAIFKNPGFTIGILTAMIVYMLGYFNSVIMPFYLEETLGLSALTAGFCMMAIPAANVISAPIGG
NLGDHSGAERVSFFALFLWCVPMGLFAAVTPNWPLGWIVFGLAWSGLANGAFQNNPMMMDNVAPRFQGLAGSMAALGRNL
GMTIGVALVTSLLYLNMSTQAGRYIHDYPHGHPQWFIYGMHRSYDFALLLLLLAVLLLGWLNLHRLHERKQSLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=411, Percent_Identity=31.8734793187348, Blast_Score=168, Evalue=8e-43,
Organism=Escherichia coli, GI1790195, Length=292, Percent_Identity=31.8493150684932, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1789042, Length=410, Percent_Identity=25.609756097561, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1788710, Length=418, Percent_Identity=25.5980861244019, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788392, Length=311, Percent_Identity=31.1897106109325, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1790146, Length=201, Percent_Identity=23.8805970149254, Blast_Score=63, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6319657, Length=301, Percent_Identity=22.9235880398671, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6325455, Length=127, Percent_Identity=29.1338582677165, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 51565; Mature: 51565

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITMSASRRWLILIATSIVSFMATLDASIVNIALPYIARELKVPMSTVELVTSVYMIAIC
CEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VLLIFWGKLSDSVGRIWLFQLGTILFALGSLFCGLSMTLPWLLTARLIQATGAAMTMATN
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
FGIITAIFPMNQHGRALGVNSALLQLGNIAGPGIGGGVLAVLSWHWIFLINVPVALVAFL
CCEEEEEECCCCCCCEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IGVLVFPRQRPSLAGAHMDWPGYGSYSVIILGFFITVFWAQTAGLSWVTLLPGMLAFVAL
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VAFVQIERYASDPLIPFAIFKNPGFTIGILTAMIVYMLGYFNSVIMPFYLEETLGLSALT
HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
AGFCMMAIPAANVISAPIGGNLGDHSGAERVSFFALFLWCVPMGLFAAVTPNWPLGWIVF
HHHHHHHHCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GLAWSGLANGAFQNNPMMMDNVAPRFQGLAGSMAALGRNLGMTIGVALVTSLLYLNMSTQ
HHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
AGRYIHDYPHGHPQWFIYGMHRSYDFALLLLLLAVLLLGWLNLHRLHERKQSLS
CCCEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MITMSASRRWLILIATSIVSFMATLDASIVNIALPYIARELKVPMSTVELVTSVYMIAIC
CEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VLLIFWGKLSDSVGRIWLFQLGTILFALGSLFCGLSMTLPWLLTARLIQATGAAMTMATN
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
FGIITAIFPMNQHGRALGVNSALLQLGNIAGPGIGGGVLAVLSWHWIFLINVPVALVAFL
CCEEEEEECCCCCCCEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IGVLVFPRQRPSLAGAHMDWPGYGSYSVIILGFFITVFWAQTAGLSWVTLLPGMLAFVAL
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VAFVQIERYASDPLIPFAIFKNPGFTIGILTAMIVYMLGYFNSVIMPFYLEETLGLSALT
HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
AGFCMMAIPAANVISAPIGGNLGDHSGAERVSFFALFLWCVPMGLFAAVTPNWPLGWIVF
HHHHHHHHCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GLAWSGLANGAFQNNPMMMDNVAPRFQGLAGSMAALGRNLGMTIGVALVTSLLYLNMSTQ
HHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
AGRYIHDYPHGHPQWFIYGMHRSYDFALLLLLLAVLLLGWLNLHRLHERKQSLS
CCCEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]