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The map label for this gene is yclJ [H]

Identifier: 116494543

GI number: 116494543

Start: 1025363

End: 1026091

Strand: Direct

Name: yclJ [H]

Synonym: LSEI_1041

Alternate gene names: 116494543

Gene position: 1025363-1026091 (Clockwise)

Preceding gene: 116494542

Following gene: 116494544

Centisome position: 35.42

GC content: 44.31

Gene sequence:

>729_bases
ATGAAATTATTAATGATCGAAGATAACACGAGTGTCGCCGAAATGATGGCGATGTTCTTTCAAAAAGAGAAATGGGAAGT
CGTCAACGCCTATGATGGTGAAGAAGGTCTTGCTAAGTTTAAGGAAGCACCGGACAGCTTTGATATTATTACGCTTGACC
TCAATCTGCCAAAAATGGACGGCATGCAGGTCGCAAAAGAAATTCGTAAAATCAGTCAAACTGTGCCGTTGATTATGCTC
ACAGCGCGCGATACTGAAAGTGATCAGGTGTTGGGACTGGAACTTGGTGCCGACGACTATGTTACCAAGCCATTTTCACC
GATTACGTTGATTGCACGTATCAAGGCCCTACATCGTCGGGCTGAGGTAGGCGCCGAAGTGGGTGCTGAGCAGACAACAA
GCGAGCCGCCTGACGGTTTTGATGTTGAAACTGATCACTTCAAGCTCAGTACCAAAACACGTGAAGCTTATTTGGATGGT
AAGCAAATTGAAGGCTTAACACCAAAGGAATTTGATTTACTGCATACCTTGTCGAAAAGTCCGAAGCAGGTTTTCTCACG
TGAACAATTACTGCAATTGGTTTGGGATTATGAGTATTACGGTGACGAACGAACTGTAGATGCCCATATTAAAAAACTAC
GCCAAAAAGTCGAAAAAGTCGGTCCGCAAATTATTCAAACTGTTTGGGGCGTCGGCTACAAGTTTGATGATTCGGGGCTT
GATCGATGA

Upstream 100 bases:

>100_bases
AGCCCATGATGCACTGCCTTATGACTACGTGTCACCAGACGATGCACCGAAACCGCAACGCAAAAAAGGCTTTAAAGATC
TGTGAAATGAGGGGTACATC

Downstream 100 bases:

>100_bases
AGATGCTTTACCAGCAGCTGATTGGCTTTTTCTCAGTCATTATGGTGACCTTAGTGATTGTCTCGATTCTGTTTATTCGG
TCTACCACGAACACGGTTTG

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKLLMIEDNTSVAEMMAMFFQKEKWEVVNAYDGEEGLAKFKEAPDSFDIITLDLNLPKMDGMQVAKEIRKISQTVPLIML
TARDTESDQVLGLELGADDYVTKPFSPITLIARIKALHRRAEVGAEVGAEQTTSEPPDGFDVETDHFKLSTKTREAYLDG
KQIEGLTPKEFDLLHTLSKSPKQVFSREQLLQLVWDYEYYGDERTVDAHIKKLRQKVEKVGPQIIQTVWGVGYKFDDSGL
DR

Sequences:

>Translated_242_residues
MKLLMIEDNTSVAEMMAMFFQKEKWEVVNAYDGEEGLAKFKEAPDSFDIITLDLNLPKMDGMQVAKEIRKISQTVPLIML
TARDTESDQVLGLELGADDYVTKPFSPITLIARIKALHRRAEVGAEVGAEQTTSEPPDGFDVETDHFKLSTKTREAYLDG
KQIEGLTPKEFDLLHTLSKSPKQVFSREQLLQLVWDYEYYGDERTVDAHIKKLRQKVEKVGPQIIQTVWGVGYKFDDSGL
DR
>Mature_242_residues
MKLLMIEDNTSVAEMMAMFFQKEKWEVVNAYDGEEGLAKFKEAPDSFDIITLDLNLPKMDGMQVAKEIRKISQTVPLIML
TARDTESDQVLGLELGADDYVTKPFSPITLIARIKALHRRAEVGAEVGAEQTTSEPPDGFDVETDHFKLSTKTREAYLDG
KQIEGLTPKEFDLLHTLSKSPKQVFSREQLLQLVWDYEYYGDERTVDAHIKKLRQKVEKVGPQIIQTVWGVGYKFDDSGL
DR

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=237, Percent_Identity=36.7088607594937, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1786599, Length=240, Percent_Identity=39.1666666666667, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1789809, Length=240, Percent_Identity=34.5833333333333, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1790860, Length=235, Percent_Identity=35.7446808510638, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI2367329, Length=234, Percent_Identity=36.7521367521368, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI87082012, Length=236, Percent_Identity=33.8983050847458, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1790863, Length=237, Percent_Identity=32.4894514767932, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1789402, Length=237, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786784, Length=238, Percent_Identity=33.1932773109244, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1790552, Length=238, Percent_Identity=33.6134453781513, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787375, Length=238, Percent_Identity=34.0336134453782, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786911, Length=237, Percent_Identity=31.6455696202532, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787229, Length=232, Percent_Identity=31.4655172413793, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI145693140, Length=239, Percent_Identity=29.7071129707113, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788550, Length=232, Percent_Identity=26.2931034482759, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27521; Mature: 27521

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLMIEDNTSVAEMMAMFFQKEKWEVVNAYDGEEGLAKFKEAPDSFDIITLDLNLPKMD
CEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCCCC
GMQVAKEIRKISQTVPLIMLTARDTESDQVLGLELGADDYVTKPFSPITLIARIKALHRR
HHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
AEVGAEVGAEQTTSEPPDGFDVETDHFKLSTKTREAYLDGKQIEGLTPKEFDLLHTLSKS
HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
PKQVFSREQLLQLVWDYEYYGDERTVDAHIKKLRQKVEKVGPQIIQTVWGVGYKFDDSGL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEECCCCC
DR
CC
>Mature Secondary Structure
MKLLMIEDNTSVAEMMAMFFQKEKWEVVNAYDGEEGLAKFKEAPDSFDIITLDLNLPKMD
CEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCCCC
GMQVAKEIRKISQTVPLIMLTARDTESDQVLGLELGADDYVTKPFSPITLIARIKALHRR
HHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
AEVGAEVGAEQTTSEPPDGFDVETDHFKLSTKTREAYLDGKQIEGLTPKEFDLLHTLSKS
HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
PKQVFSREQLLQLVWDYEYYGDERTVDAHIKKLRQKVEKVGPQIIQTVWGVGYKFDDSGL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEECCCCC
DR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]