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The map label for this gene is 116494490

Identifier: 116494490

GI number: 116494490

Start: 971732

End: 971920

Strand: Direct

Name: 116494490

Synonym: LSEI_0986

Alternate gene names: NA

Gene position: 971732-971920 (Clockwise)

Preceding gene: 116494489

Following gene: 116494496

Centisome position: 33.56

GC content: 42.33

Gene sequence:

>189_bases
ATGGAAAATAATATCCACGCACTCAGAATGCGCCAAAAATTAACCCAACAGGAACTGGCTGATGCTGTAAATGTAACTCG
GCAAACGATTAATGCCATCGAGAATAATAAATACGACCCAACGCTCTCCTTAGCCTTCGCACTTGCAGAATGTTTAGAGA
CGACAGTGGACCAACTGTTTCAGCATTAA

Upstream 100 bases:

>100_bases
CGAGCAGATAAGACTGATAAAGAACCGGGAAGGGTGTTAATTGGCACGATTGTCATTGTTGTTGTTGTGCTAACCTTAGG
CATGATTGGATTGATGTTCC

Downstream 100 bases:

>100_bases
AGAAATTAAATATTATTTGAAGCTACAAAAAGACGAGTGATTTTTCCGATTACGGCACACAGGCGACGGAAAAGGCACTC
GTCTTTCATTTTTCCATAGA

Product: transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator XRE Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Pbsx Family; Transcriptional Regulator PBSX Family

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MENNIHALRMRQKLTQQELADAVNVTRQTINAIENNKYDPTLSLAFALAECLETTVDQLFQH

Sequences:

>Translated_62_residues
MENNIHALRMRQKLTQQELADAVNVTRQTINAIENNKYDPTLSLAFALAECLETTVDQLFQH
>Mature_62_residues
MENNIHALRMRQKLTQQELADAVNVTRQTINAIENNKYDPTLSLAFALAECLETTVDQLFQH

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7115; Mature: 7115

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNIHALRMRQKLTQQELADAVNVTRQTINAIENNKYDPTLSLAFALAECLETTVDQLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
QH
CC
>Mature Secondary Structure
MENNIHALRMRQKLTQQELADAVNVTRQTINAIENNKYDPTLSLAFALAECLETTVDQLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
QH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA