| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
Click here to switch to the map view.
The map label for this gene is 116494496
Identifier: 116494496
GI number: 116494496
Start: 977997
End: 978674
Strand: Direct
Name: 116494496
Synonym: LSEI_0992
Alternate gene names: NA
Gene position: 977997-978674 (Clockwise)
Preceding gene: 116494490
Following gene: 116494499
Centisome position: 33.78
GC content: 47.64
Gene sequence:
>678_bases ATGCAAAAGGCGCAACTTGAACCAACTGCTTTCGCTGCTGATGAGTGTCAGCAAATTGGCGGTTCATTCAGCGCCAATAA AAGAGGAGCGATTTTTTTGATAATACGTCCAAGCAAACCGGACGATGCGCCGCAAGTAGCACCGTTGATCGATATTGTGT TTACGGAGATGGAAATTCCTCAGTTAATGAAGGTTCCTAAGAAGACCCTGTATTCGGTTTTGGAACAAGCCTTTTTATTG CCAACTTACCGGTACGGTTACCCGCAAATGTTGGTGGCTGATCAGGATGGTCAGATTGAAGGGATTGCTGTTGGCTATTT GCATGAGCAGGAAGCCCATATCGACGATGCTTTAAAACCGTTGTTGCCTAAGCTGGGATTGACCCCAAATTCATCGCTTT TTTCAGACACCGAAACTTATGCCGGCGAGTGGTATTTAGATACGCTAGCAGTCGCCGAGACAGCGCAGGGACATGGGATC GGAACCAAATTATTAAACGCAGTCGATACGGTTGCCCGTGCTCGGCACGCTAAAGTGGTTAGTCTGAACGTGGATCAGCA GAATCCCCGGGCTAAAAAGTTATATGAGCGCAATGGTTTTCTTAAACACGGCGAGTTGATGATTGGCAGTCATCGATACG ATCATATGCTGCGGCCGGTTGTGGGCGAGGAAGTTTAG
Upstream 100 bases:
>100_bases AGATTCACTGAAAAATGGACTCATTCGCCCAAAAACATTTTGATTATGTTTAATTGCCATCACAACGCGAATGTTCGCCT TTTTTGCTATAATAGAAAGC
Downstream 100 bases:
>100_bases TGTTAGTCAATAGGTTAGCCTAAAGCCCTTAGCCCGCCGAACGCCGCAATCTCCGACCAGATGGGGTTTGCGACGCGCAG CCAGAGTGGAGACGGCGTTT
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; GNAT Family N-Acetyltransferase; Acetyltransferase Family Protein; Acetyltransferase Gnat Family
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MQKAQLEPTAFAADECQQIGGSFSANKRGAIFLIIRPSKPDDAPQVAPLIDIVFTEMEIPQLMKVPKKTLYSVLEQAFLL PTYRYGYPQMLVADQDGQIEGIAVGYLHEQEAHIDDALKPLLPKLGLTPNSSLFSDTETYAGEWYLDTLAVAETAQGHGI GTKLLNAVDTVARARHAKVVSLNVDQQNPRAKKLYERNGFLKHGELMIGSHRYDHMLRPVVGEEV
Sequences:
>Translated_225_residues MQKAQLEPTAFAADECQQIGGSFSANKRGAIFLIIRPSKPDDAPQVAPLIDIVFTEMEIPQLMKVPKKTLYSVLEQAFLL PTYRYGYPQMLVADQDGQIEGIAVGYLHEQEAHIDDALKPLLPKLGLTPNSSLFSDTETYAGEWYLDTLAVAETAQGHGI GTKLLNAVDTVARARHAKVVSLNVDQQNPRAKKLYERNGFLKHGELMIGSHRYDHMLRPVVGEEV >Mature_225_residues MQKAQLEPTAFAADECQQIGGSFSANKRGAIFLIIRPSKPDDAPQVAPLIDIVFTEMEIPQLMKVPKKTLYSVLEQAFLL PTYRYGYPQMLVADQDGQIEGIAVGYLHEQEAHIDDALKPLLPKLGLTPNSSLFSDTETYAGEWYLDTLAVAETAQGHGI GTKLLNAVDTVARARHAKVVSLNVDQQNPRAKKLYERNGFLKHGELMIGSHRYDHMLRPVVGEEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24943; Mature: 24943
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKAQLEPTAFAADECQQIGGSFSANKRGAIFLIIRPSKPDDAPQVAPLIDIVFTEMEIP CCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCH QLMKVPKKTLYSVLEQAFLLPTYRYGYPQMLVADQDGQIEGIAVGYLHEQEAHIDDALKP HHHHCCHHHHHHHHHHHHHCCHHCCCCCEEEEECCCCCEEEEEEEEEECCHHHHHHHHHH LLPKLGLTPNSSLFSDTETYAGEWYLDTLAVAETAQGHGIGTKLLNAVDTVARARHAKVV HHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEE SLNVDQQNPRAKKLYERNGFLKHGELMIGSHRYDHMLRPVVGEEV EEECCCCCCHHHHHHHHCCCEECCCEEECCCHHHHHHHHHCCCCC >Mature Secondary Structure MQKAQLEPTAFAADECQQIGGSFSANKRGAIFLIIRPSKPDDAPQVAPLIDIVFTEMEIP CCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCH QLMKVPKKTLYSVLEQAFLLPTYRYGYPQMLVADQDGQIEGIAVGYLHEQEAHIDDALKP HHHHCCHHHHHHHHHHHHHCCHHCCCCCEEEEECCCCCEEEEEEEEEECCHHHHHHHHHH LLPKLGLTPNSSLFSDTETYAGEWYLDTLAVAETAQGHGIGTKLLNAVDTVARARHAKVV HHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEE SLNVDQQNPRAKKLYERNGFLKHGELMIGSHRYDHMLRPVVGEEV EEECCCCCCHHHHHHHHCCCEECCCEEECCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA