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The map label for this gene is yvdM [H]

Identifier: 116494488

GI number: 116494488

Start: 970241

End: 970933

Strand: Direct

Name: yvdM [H]

Synonym: LSEI_0983

Alternate gene names: 116494488

Gene position: 970241-970933 (Clockwise)

Preceding gene: 116494487

Following gene: 116494489

Centisome position: 33.51

GC content: 44.59

Gene sequence:

>693_bases
ATGCTTAAAGGCTTCATTTTTGATCTTGACGGGGTGGTCACCGATTCAGCTAAGTATCATTTAGCCGCCTGGGGGGAGTT
GGCAAAACAATTAGGGATTACCCTGCCAGCTACGGCAAATGAAGCTTTACGTGGCCGTTCCCGAATGGACTCGTTAGCGA
TCATCCTCGGTTACGGTGATCAACAGAAGCAATATACCGAAGTTGAGAAAGAAAACTTAGCAGATGAAAAAAATCGACGT
TATCTTCAATTGATTGCCAATATGACGCCAGCCGATATTCTGCCGGGTATCAGTCAACTTTTATCGGACGCCAAGGCAAG
GCATTTAAAATTGGCAATCGCATCTGCTTCAAAAAATGCACCGACTATTTTGCGTCAATTGAAGTTATTTGATCAATTTG
ATGCGATTGTTGATCCAGCTAGTCTGCATCGCGGGAAGCCAGATCCTGAAATTTTCATCAAAGCGCAGAACTTGTTGCAA
TTGCAAGCAGATGAAGTGGTGAGTTTTGAAGATGCATCTGCTGGTATTGCAGCAATTAATGCTGCTGGTCAGTTTTCGGT
GGGTATCGGTGATGCCAAGGCGCTCGCAGCTGCTGATTATTTCGTGGCAAACACAGGCTTATTGCGACTCAAATCAATCA
CGACAGCCTTCACAAAATGGCAAAACGCGTTGAATAAGAAAGGAGATGGATGA

Upstream 100 bases:

>100_bases
GTGGACGTGAGTGAGGAGGTCAACGTGATCTTGTTAGCCGGCCCGTCAATTGATATTGAAGTGAATGGTGAGCTGCAGCA
CTTGGAAAAGGGGGATGACC

Downstream 100 bases:

>100_bases
TGTCATGGTTGAGATTGATTTGAACCATCTTTATAAGAAGTACCCGAATGCCGCACAAGATTCTGTCAAAGATTTCGATC
TGCACATTAAGAATAAGAAG

Product: HAD family sugar phosphatase

Products: NA

Alternate protein names: Beta-PGM [H]

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MLKGFIFDLDGVVTDSAKYHLAAWGELAKQLGITLPATANEALRGRSRMDSLAIILGYGDQQKQYTEVEKENLADEKNRR
YLQLIANMTPADILPGISQLLSDAKARHLKLAIASASKNAPTILRQLKLFDQFDAIVDPASLHRGKPDPEIFIKAQNLLQ
LQADEVVSFEDASAGIAAINAAGQFSVGIGDAKALAAADYFVANTGLLRLKSITTAFTKWQNALNKKGDG

Sequences:

>Translated_230_residues
MLKGFIFDLDGVVTDSAKYHLAAWGELAKQLGITLPATANEALRGRSRMDSLAIILGYGDQQKQYTEVEKENLADEKNRR
YLQLIANMTPADILPGISQLLSDAKARHLKLAIASASKNAPTILRQLKLFDQFDAIVDPASLHRGKPDPEIFIKAQNLLQ
LQADEVVSFEDASAGIAAINAAGQFSVGIGDAKALAAADYFVANTGLLRLKSITTAFTKWQNALNKKGDG
>Mature_230_residues
MLKGFIFDLDGVVTDSAKYHLAAWGELAKQLGITLPATANEALRGRSRMDSLAIILGYGDQQKQYTEVEKENLADEKNRR
YLQLIANMTPADILPGISQLLSDAKARHLKLAIASASKNAPTILRQLKLFDQFDAIVDPASLHRGKPDPEIFIKAQNLLQ
LQADEVVSFEDASAGIAAINAAGQFSVGIGDAKALAAADYFVANTGLLRLKSITTAFTKWQNALNKKGDG

Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1787576, Length=221, Percent_Identity=42.0814479638009, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1789046, Length=188, Percent_Identity=29.2553191489362, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010976
- InterPro:   IPR010972
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =5.4.2.6 [H]

Molecular weight: Translated: 24868; Mature: 24868

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGFIFDLDGVVTDSAKYHLAAWGELAKQLGITLPATANEALRGRSRMDSLAIILGYGD
CCCCEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECCC
QQKQYTEVEKENLADEKNRRYLQLIANMTPADILPGISQLLSDAKARHLKLAIASASKNA
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCH
PTILRQLKLFDQFDAIVDPASLHRGKPDPEIFIKAQNLLQLQADEVVSFEDASAGIAAIN
HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCEEEEE
AAGQFSVGIGDAKALAAADYFVANTGLLRLKSITTAFTKWQNALNKKGDG
CCCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLKGFIFDLDGVVTDSAKYHLAAWGELAKQLGITLPATANEALRGRSRMDSLAIILGYGD
CCCCEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECCC
QQKQYTEVEKENLADEKNRRYLQLIANMTPADILPGISQLLSDAKARHLKLAIASASKNA
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCH
PTILRQLKLFDQFDAIVDPASLHRGKPDPEIFIKAQNLLQLQADEVVSFEDASAGIAAIN
HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCEEEEE
AAGQFSVGIGDAKALAAADYFVANTGLLRLKSITTAFTKWQNALNKKGDG
CCCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]