| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is yvdK [H]
Identifier: 116494487
GI number: 116494487
Start: 967987
End: 970248
Strand: Direct
Name: yvdK [H]
Synonym: LSEI_0982
Alternate gene names: 116494487
Gene position: 967987-970248 (Clockwise)
Preceding gene: 116494486
Following gene: 116494488
Centisome position: 33.43
GC content: 47.26
Gene sequence:
>2262_bases ATGAAAAGAACATTTGCAGTCGATCCGTGGATGATTGCAACCCATCAGTTTCATCCAGAGGACAAGCGGCTTCAAGAAAG TTTGACGGCAATTGGTAACGGCTACATGGGCATGCGCGGGAATTTTGAGGAACAGTACTCGGGGGATCAGCTTTCGGGAA CTTATCTCGGTGGTGTTTGGTTTCCGGATAAAACCCGCGTTGGTTGGTGGAAAAATGGCTATCCTGCGTACTTTGGCAAA GCAATCAATGCACCCAGCTTTTTGCCAATTCGCATCAAAGTGAATGAACAACCGGTTGATTTGGCCAAAAACAGTTTTCG GGATTTCTATCTGGCACTTGATTTACATCAGGGATTATTAACTCGGCAGTTTATCTATGAAGGGGATCAGGTTGAGGTTC GGTTTGAGTTTCAACGATTTTTGAGCAATGTGGTGAAGGAAGCAGCCTTGATTAACGTGAAAGCAACTGTGCTTAGCGGT AAGGCAACGATCACATTTGATGCTGGACTTGAAGGTCGTGTCGCTAATGAAGATAGCAACTATGATGAGCGGTTTTGGGA ACCGCAAGCTGAGGATCCCACTCAAAAAACCATTCAATTGCAAACCAAGCCAAATCCTTACGATGTACCGCAATTCACCG TTCTATTGAAGCAACAGTTGCGTGTCAATCGTCAACCGGTCACAGGCGTTGTCACGACTGGCAACGGCTGGCTAAACGAA CAAATTGTGGCTGATGTGGCAGCTGGCGAAACTTATCAACTGGAAAAGGATGTCATTGTGGTTACTAGCCGCGATGTTGC GCCTTCTGATCAGCAGCAAACAGCCGCAGCTTTGATGACCACATTGCAAACACACAGTTTTTCCGAACAACTGGCTGCCC ATACGCAGCTTTGGGCGCAACGCTGGGAGCAAAGTGATGTGGTCATTGAAGGCGATCCGGCCGCACAACAAGGCATTCGG TTTAATATTGCGCAATTGTTTATGACGTACTATGGCGAAGATAAGCGCCTTAACATTGGGCCTAAAGGTTTTACAGGTGA AAAATACGGCGGTGCCACTTACTGGGATACTGAAGCCTATATTGTACCAATGTATCTGGCAGTGACGCCCCCGGATGTGA CGCGAGCACTTCTTCAATATCGCCACGATCAATTACCTGGTGCGTATCACAATGCACAGCAGCAAGGACTGGCCGGTGCT TTGTTCCCAATGATGACCTTTAATGGCATCGAGTGTCATAACGAGTGGGAGATCACATTTGAAGAAATCCATCGTAATGG TGCAGTTGCGTTCGCGATTTATCAATACACGGCTTATACCGGCGATGAAAGTTATGTCAACCGTGATGGTATTGAGGTCT TGGTGGGGATTGCCCGTTTCTGGGCTGACCGGGTGCATTTTAGCAAACGTGCCAATCAGTATATGATTCACGGGGTAACC GGTCCTAATGAATATGAAAACAATGTTAACAACAACTGGTATACCAACACCATGGCATCGTGGACGTTAAGTTACACGTT AGCGCGCCTGCCCAAGGCGAATGCCGACGTGGTCGCTAAACTTGCGGTGACTGCAGAAGAAAAAGCTAAGTGGCAAGATA TTATTGATCGGATGTACTATCCCGTTGACGATGAATTAGGGATCTTTGTTCAACACGATACCTTTCTTGATAAAGATTTG CGACCCGCCAGTTCGATTCCTGCTGACCAGCGGCCGATTAACCAACATTGGTCATGGGACCGGATCTTAAGGTCGCCTTT TATCAAACAGGCTGACGTCTTGCAGGGCATTTATTTTCTCAATGACCGCTTCACCCAAGCACAAAAAGAACGCAATTTTG ATTTCTATGAGCCGATGACGGTTCACGAGAGTTCATTAAGTGCGTCCATCCATGCCATCCTAGCAGCTGAATTAGGGAAA ACGGAAAAGGCCGTGGCGTTATATGCGCGAACTGCGCGTCTAGATCTGGACAATTATAATAACGACACTGATGACGGGCT TCACATTACGTCCATGAGCGGTAGTTGGTTATCAATCGTCCAAGGCTTTGCGGGGATGCGCTATGATCACGACCGGTTAC GATTCAAGCCATTTTTGCCAAAAGAATGGCACCGCTTCAGCTTTAAAATCAATTATCGTGGCCGTTTGCTGGCAGTGGAC GTGAGTGAGGAGGTCAACGTGATCTTGTTAGCCGGCCCGTCAATTGATATTGAAGTGAATGGTGAGCTGCAGCACTTGGA AAAGGGGGATGACCATGCTTAA
Upstream 100 bases:
>100_bases TTGTATAGCGCTTTCATTCATCTATAATAAAGCGTGTCCTTTAAGTGGTTGTTGCCATGACTATCGTAAAGAAAATGGTC ACAAGGGAGAAGTGGAGAAG
Downstream 100 bases:
>100_bases AGGCTTCATTTTTGATCTTGACGGGGTGGTCACCGATTCAGCTAAGTATCATTTAGCCGCCTGGGGGGAGTTGGCAAAAC AATTAGGGATTACCCTGCCA
Product: maltose phosphorylase
Products: D-glucose; beta-D-glucose 1-phosphate
Alternate protein names: NA
Number of amino acids: Translated: 753; Mature: 753
Protein sequence:
>753_residues MKRTFAVDPWMIATHQFHPEDKRLQESLTAIGNGYMGMRGNFEEQYSGDQLSGTYLGGVWFPDKTRVGWWKNGYPAYFGK AINAPSFLPIRIKVNEQPVDLAKNSFRDFYLALDLHQGLLTRQFIYEGDQVEVRFEFQRFLSNVVKEAALINVKATVLSG KATITFDAGLEGRVANEDSNYDERFWEPQAEDPTQKTIQLQTKPNPYDVPQFTVLLKQQLRVNRQPVTGVVTTGNGWLNE QIVADVAAGETYQLEKDVIVVTSRDVAPSDQQQTAAALMTTLQTHSFSEQLAAHTQLWAQRWEQSDVVIEGDPAAQQGIR FNIAQLFMTYYGEDKRLNIGPKGFTGEKYGGATYWDTEAYIVPMYLAVTPPDVTRALLQYRHDQLPGAYHNAQQQGLAGA LFPMMTFNGIECHNEWEITFEEIHRNGAVAFAIYQYTAYTGDESYVNRDGIEVLVGIARFWADRVHFSKRANQYMIHGVT GPNEYENNVNNNWYTNTMASWTLSYTLARLPKANADVVAKLAVTAEEKAKWQDIIDRMYYPVDDELGIFVQHDTFLDKDL RPASSIPADQRPINQHWSWDRILRSPFIKQADVLQGIYFLNDRFTQAQKERNFDFYEPMTVHESSLSASIHAILAAELGK TEKAVALYARTARLDLDNYNNDTDDGLHITSMSGSWLSIVQGFAGMRYDHDRLRFKPFLPKEWHRFSFKINYRGRLLAVD VSEEVNVILLAGPSIDIEVNGELQHLEKGDDHA
Sequences:
>Translated_753_residues MKRTFAVDPWMIATHQFHPEDKRLQESLTAIGNGYMGMRGNFEEQYSGDQLSGTYLGGVWFPDKTRVGWWKNGYPAYFGK AINAPSFLPIRIKVNEQPVDLAKNSFRDFYLALDLHQGLLTRQFIYEGDQVEVRFEFQRFLSNVVKEAALINVKATVLSG KATITFDAGLEGRVANEDSNYDERFWEPQAEDPTQKTIQLQTKPNPYDVPQFTVLLKQQLRVNRQPVTGVVTTGNGWLNE QIVADVAAGETYQLEKDVIVVTSRDVAPSDQQQTAAALMTTLQTHSFSEQLAAHTQLWAQRWEQSDVVIEGDPAAQQGIR FNIAQLFMTYYGEDKRLNIGPKGFTGEKYGGATYWDTEAYIVPMYLAVTPPDVTRALLQYRHDQLPGAYHNAQQQGLAGA LFPMMTFNGIECHNEWEITFEEIHRNGAVAFAIYQYTAYTGDESYVNRDGIEVLVGIARFWADRVHFSKRANQYMIHGVT GPNEYENNVNNNWYTNTMASWTLSYTLARLPKANADVVAKLAVTAEEKAKWQDIIDRMYYPVDDELGIFVQHDTFLDKDL RPASSIPADQRPINQHWSWDRILRSPFIKQADVLQGIYFLNDRFTQAQKERNFDFYEPMTVHESSLSASIHAILAAELGK TEKAVALYARTARLDLDNYNNDTDDGLHITSMSGSWLSIVQGFAGMRYDHDRLRFKPFLPKEWHRFSFKINYRGRLLAVD VSEEVNVILLAGPSIDIEVNGELQHLEKGDDHA >Mature_753_residues MKRTFAVDPWMIATHQFHPEDKRLQESLTAIGNGYMGMRGNFEEQYSGDQLSGTYLGGVWFPDKTRVGWWKNGYPAYFGK AINAPSFLPIRIKVNEQPVDLAKNSFRDFYLALDLHQGLLTRQFIYEGDQVEVRFEFQRFLSNVVKEAALINVKATVLSG KATITFDAGLEGRVANEDSNYDERFWEPQAEDPTQKTIQLQTKPNPYDVPQFTVLLKQQLRVNRQPVTGVVTTGNGWLNE QIVADVAAGETYQLEKDVIVVTSRDVAPSDQQQTAAALMTTLQTHSFSEQLAAHTQLWAQRWEQSDVVIEGDPAAQQGIR FNIAQLFMTYYGEDKRLNIGPKGFTGEKYGGATYWDTEAYIVPMYLAVTPPDVTRALLQYRHDQLPGAYHNAQQQGLAGA LFPMMTFNGIECHNEWEITFEEIHRNGAVAFAIYQYTAYTGDESYVNRDGIEVLVGIARFWADRVHFSKRANQYMIHGVT GPNEYENNVNNNWYTNTMASWTLSYTLARLPKANADVVAKLAVTAEEKAKWQDIIDRMYYPVDDELGIFVQHDTFLDKDL RPASSIPADQRPINQHWSWDRILRSPFIKQADVLQGIYFLNDRFTQAQKERNFDFYEPMTVHESSLSASIHAILAAELGK TEKAVALYARTARLDLDNYNNDTDDGLHITSMSGSWLSIVQGFAGMRYDHDRLRFKPFLPKEWHRFSFKINYRGRLLAVD VSEEVNVILLAGPSIDIEVNGELQHLEKGDDHA
Specific function: Unknown
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=486, Percent_Identity=25.7201646090535, Blast_Score=130, Evalue=4e-30, Organism=Escherichia coli, GI1787575, Length=745, Percent_Identity=28.4563758389262, Blast_Score=264, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6325283, Length=512, Percent_Identity=22.0703125, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24583760, Length=366, Percent_Identity=24.5901639344262, Blast_Score=85, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: 2.4.1.8
Molecular weight: Translated: 85827; Mature: 85827
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTFAVDPWMIATHQFHPEDKRLQESLTAIGNGYMGMRGNFEEQYSGDQLSGTYLGGVW CCCEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEEEE FPDKTRVGWWKNGYPAYFGKAINAPSFLPIRIKVNEQPVDLAKNSFRDFYLALDLHQGLL CCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCHHHHHHCCCEEEEEEEHHHHHH TRQFIYEGDQVEVRFEFQRFLSNVVKEAALINVKATVLSGKATITFDAGLEGRVANEDSN HHHHHCCCCEEEEEEHHHHHHHHHHHHHHEEEEEEEEEECCEEEEECCCCCCEECCCCCC YDERFWEPQAEDPTQKTIQLQTKPNPYDVPQFTVLLKQQLRVNRQPVTGVVTTGNGWLNE CHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCH QIVADVAAGETYQLEKDVIVVTSRDVAPSDQQQTAAALMTTLQTHSFSEQLAAHTQLWAQ HHHHHHHCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RWEQSDVVIEGDPAAQQGIRFNIAQLFMTYYGEDKRLNIGPKGFTGEKYGGATYWDTEAY HCCCCCEEEECCCCHHCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEECCCEE IVPMYLAVTPPDVTRALLQYRHDQLPGAYHNAQQQGLAGALFPMMTFNGIECHNEWEITF EEEEEEEECCHHHHHHHHHHHHHCCCCHHHCHHHCCCCHHHHHHHHCCCEEECCCCCEEH EEIHRNGAVAFAIYQYTAYTGDESYVNRDGIEVLVGIARFWADRVHFSKRANQYMIHGVT HHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC GPNEYENNVNNNWYTNTMASWTLSYTLARLPKANADVVAKLAVTAEEKAKWQDIIDRMYY CCCHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHCC PVDDELGIFVQHDTFLDKDLRPASSIPADQRPINQHWSWDRILRSPFIKQADVLQGIYFL CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHH NDRFTQAQKERNFDFYEPMTVHESSLSASIHAILAAELGKTEKAVALYARTARLDLDNYN CCHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCC NDTDDGLHITSMSGSWLSIVQGFAGMRYDHDRLRFKPFLPKEWHRFSFKINYRGRLLAVD CCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCEEEEEEECCCEEEEEE VSEEVNVILLAGPSIDIEVNGELQHLEKGDDHA CCCCCCEEEEECCCEEEEECCCHHCCCCCCCCC >Mature Secondary Structure MKRTFAVDPWMIATHQFHPEDKRLQESLTAIGNGYMGMRGNFEEQYSGDQLSGTYLGGVW CCCEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEEEE FPDKTRVGWWKNGYPAYFGKAINAPSFLPIRIKVNEQPVDLAKNSFRDFYLALDLHQGLL CCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCHHHHHHCCCEEEEEEEHHHHHH TRQFIYEGDQVEVRFEFQRFLSNVVKEAALINVKATVLSGKATITFDAGLEGRVANEDSN HHHHHCCCCEEEEEEHHHHHHHHHHHHHHEEEEEEEEEECCEEEEECCCCCCEECCCCCC YDERFWEPQAEDPTQKTIQLQTKPNPYDVPQFTVLLKQQLRVNRQPVTGVVTTGNGWLNE CHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCH QIVADVAAGETYQLEKDVIVVTSRDVAPSDQQQTAAALMTTLQTHSFSEQLAAHTQLWAQ HHHHHHHCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RWEQSDVVIEGDPAAQQGIRFNIAQLFMTYYGEDKRLNIGPKGFTGEKYGGATYWDTEAY HCCCCCEEEECCCCHHCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEECCCEE IVPMYLAVTPPDVTRALLQYRHDQLPGAYHNAQQQGLAGALFPMMTFNGIECHNEWEITF EEEEEEEECCHHHHHHHHHHHHHCCCCHHHCHHHCCCCHHHHHHHHCCCEEECCCCCEEH EEIHRNGAVAFAIYQYTAYTGDESYVNRDGIEVLVGIARFWADRVHFSKRANQYMIHGVT HHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC GPNEYENNVNNNWYTNTMASWTLSYTLARLPKANADVVAKLAVTAEEKAKWQDIIDRMYY CCCHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHCC PVDDELGIFVQHDTFLDKDLRPASSIPADQRPINQHWSWDRILRSPFIKQADVLQGIYFL CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHH NDRFTQAQKERNFDFYEPMTVHESSLSASIHAILAAELGKTEKAVALYARTARLDLDNYN CCHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCC NDTDDGLHITSMSGSWLSIVQGFAGMRYDHDRLRFKPFLPKEWHRFSFKINYRGRLLAVD CCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCEEEEEEECCCEEEEEE VSEEVNVILLAGPSIDIEVNGELQHLEKGDDHA CCCCCCEEEEECCCEEEEECCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: maltose; phosphate
Specific reaction: maltose + phosphate = D-glucose + beta-D-glucose 1-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]