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The map label for this gene is swrAB [H]

Identifier: 116494440

GI number: 116494440

Start: 911970

End: 913073

Strand: Direct

Name: swrAB [H]

Synonym: LSEI_0933

Alternate gene names: 116494440

Gene position: 911970-913073 (Clockwise)

Preceding gene: 116494439

Following gene: 116494441

Centisome position: 31.5

GC content: 51.99

Gene sequence:

>1104_bases
ATGGCAGTTGTAGTTGCCTTACTTATCAATCCGGTTGGTTTGGTGTTTTGGCTAGCGCTAGGTTTAACGATTTGGTTTGC
TGTCAATCGCACTGATCGCGAGCGCCGCCGGTATCTGCGCGCAATTCATCCCAAACATCCAGAAATTGGTCGGTTCTTTT
GGATCGGACTTGTCGTAGGTGCGCTAGTCTCGCTGGTGATGGTTATTGGACGACTGCAGATCAGTTTAGCTGCTTTGCTT
GCATTAAGCGGCTTGACGTTAGTAGCATTGCTATTTTCTAAATGGCGATTTAGCCCTTGGTGGCTAGGTCTTGCCAGTCT
GGCGGCAGTTGGTCAGTCTGGTTTGCTAGCTGAACAGCATGCAGCTAATTTAGCTATTTTGGTCGGCCTATTATGGCTAA
CACAAGCTGGACTTGCGCGATTCAACCGCGGCGATGAGATCGAGTCGCCTGTGATTCAACAAGACCGCCGCCAGCGGCAA
AGTGCGGCGTTTGAGTTGCGGCAACTGTTCTGGGTGCCGTTAATCTTACCTGTTGCTGTTGAAAACGTCAGCAACCTCCC
ACTGCTGGCGGTTACAGTGCAGTCTTTGACTTTTGTGGGCTTGCCATTGCTTTTAGGTGCGACCTTCATGACTCCGCGAG
ATCGCGCTCAGACGGCTTGGCGGCGAAGTTGGCCGTGGTATGGCGGCGCAGGTGGCGTGCTTATCGTTTATGGCATTGTT
GCCCGCACCATGACCTTGCCTTTGCTGGTTAGTCTTGTCTTTCCAGCAGTGGTGAGTTTAGTATTGGTTGGCGGCTTCAT
TTGGCAGGGACGGCAGGTGCATCTGACGGTGACTTTAGCCGATCAAGGTGTGGTGTTGATTGGTGTCGTGCCGCATACAC
CGGCTGCAGAGATGGGCTTACAACCCGGTGATCGTGTATTGGCCTGCAATCACCATTCCGTGAACAATTCTCGTGAGCTT
TACGATGCCATTCAAAAAGAACCAACCTATTGCCGCTTGCGGCTTCGACAGGCAGATGGTGAGCTGCGATTAGCTGAGAC
GGCCATTTTTGCCGGTGCCCCACACGAACTTGGTATGATTTTATTTCCGGAGGAGACAGCATGA

Upstream 100 bases:

>100_bases
TCGGCTATGCGTGCCTACTCACATTTTGATTTTTATGACGTTGTGGGAGCCTCCGGCGATTTCTGCTATACTGGTCACAG
TGAATATTGGAGGGTTACCG

Downstream 100 bases:

>100_bases
AGAAGATCTTGATTGTTGATGACGAACCTGCGATTTTGACGTTGCTGCAATATAATTTGGAAGCTGAACACTATCAGGTC
GAAACAGCGACAGATGGTCA

Product: trypsin-like serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MAVVVALLINPVGLVFWLALGLTIWFAVNRTDRERRRYLRAIHPKHPEIGRFFWIGLVVGALVSLVMVIGRLQISLAALL
ALSGLTLVALLFSKWRFSPWWLGLASLAAVGQSGLLAEQHAANLAILVGLLWLTQAGLARFNRGDEIESPVIQQDRRQRQ
SAAFELRQLFWVPLILPVAVENVSNLPLLAVTVQSLTFVGLPLLLGATFMTPRDRAQTAWRRSWPWYGGAGGVLIVYGIV
ARTMTLPLLVSLVFPAVVSLVLVGGFIWQGRQVHLTVTLADQGVVLIGVVPHTPAAEMGLQPGDRVLACNHHSVNNSREL
YDAIQKEPTYCRLRLRQADGELRLAETAIFAGAPHELGMILFPEETA

Sequences:

>Translated_367_residues
MAVVVALLINPVGLVFWLALGLTIWFAVNRTDRERRRYLRAIHPKHPEIGRFFWIGLVVGALVSLVMVIGRLQISLAALL
ALSGLTLVALLFSKWRFSPWWLGLASLAAVGQSGLLAEQHAANLAILVGLLWLTQAGLARFNRGDEIESPVIQQDRRQRQ
SAAFELRQLFWVPLILPVAVENVSNLPLLAVTVQSLTFVGLPLLLGATFMTPRDRAQTAWRRSWPWYGGAGGVLIVYGIV
ARTMTLPLLVSLVFPAVVSLVLVGGFIWQGRQVHLTVTLADQGVVLIGVVPHTPAAEMGLQPGDRVLACNHHSVNNSREL
YDAIQKEPTYCRLRLRQADGELRLAETAIFAGAPHELGMILFPEETA
>Mature_366_residues
AVVVALLINPVGLVFWLALGLTIWFAVNRTDRERRRYLRAIHPKHPEIGRFFWIGLVVGALVSLVMVIGRLQISLAALLA
LSGLTLVALLFSKWRFSPWWLGLASLAAVGQSGLLAEQHAANLAILVGLLWLTQAGLARFNRGDEIESPVIQQDRRQRQS
AAFELRQLFWVPLILPVAVENVSNLPLLAVTVQSLTFVGLPLLLGATFMTPRDRAQTAWRRSWPWYGGAGGVLIVYGIVA
RTMTLPLLVSLVFPAVVSLVLVGGFIWQGRQVHLTVTLADQGVVLIGVVPHTPAAEMGLQPGDRVLACNHHSVNNSRELY
DAIQKEPTYCRLRLRQADGELRLAETAIFAGAPHELGMILFPEETA

Specific function: Required for surface-adhering cells to differentiate into hyperflagellated and elongated swarm cells [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478 [H]

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 40349; Mature: 40218

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVVALLINPVGLVFWLALGLTIWFAVNRTDRERRRYLRAIHPKHPEIGRFFWIGLVVG
CCEEHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ALVSLVMVIGRLQISLAALLALSGLTLVALLFSKWRFSPWWLGLASLAAVGQSGLLAEQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHH
AANLAILVGLLWLTQAGLARFNRGDEIESPVIQQDRRQRQSAAFELRQLFWVPLILPVAV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENVSNLPLLAVTVQSLTFVGLPLLLGATFMTPRDRAQTAWRRSWPWYGGAGGVLIVYGIV
HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
ARTMTLPLLVSLVFPAVVSLVLVGGFIWQGRQVHLTVTLADQGVVLIGVVPHTPAAEMGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCHHHCCC
QPGDRVLACNHHSVNNSRELYDAIQKEPTYCRLRLRQADGELRLAETAIFAGAPHELGMI
CCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEHHHHCCCCCHHCCEE
LFPEETA
EECCCCC
>Mature Secondary Structure 
AVVVALLINPVGLVFWLALGLTIWFAVNRTDRERRRYLRAIHPKHPEIGRFFWIGLVVG
CEEHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ALVSLVMVIGRLQISLAALLALSGLTLVALLFSKWRFSPWWLGLASLAAVGQSGLLAEQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHH
AANLAILVGLLWLTQAGLARFNRGDEIESPVIQQDRRQRQSAAFELRQLFWVPLILPVAV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENVSNLPLLAVTVQSLTFVGLPLLLGATFMTPRDRAQTAWRRSWPWYGGAGGVLIVYGIV
HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
ARTMTLPLLVSLVFPAVVSLVLVGGFIWQGRQVHLTVTLADQGVVLIGVVPHTPAAEMGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCHHHCCC
QPGDRVLACNHHSVNNSRELYDAIQKEPTYCRLRLRQADGELRLAETAIFAGAPHELGMI
CCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEHHHHCCCCCHHCCEE
LFPEETA
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Serine endopeptidases [C]

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]