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The map label for this gene is ymfM [H]

Identifier: 116494427

GI number: 116494427

Start: 896682

End: 897611

Strand: Direct

Name: ymfM [H]

Synonym: LSEI_0920

Alternate gene names: 116494427

Gene position: 896682-897611 (Clockwise)

Preceding gene: 116494426

Following gene: 116494428

Centisome position: 30.97

GC content: 47.63

Gene sequence:

>930_bases
ATGGATGAAATTGGGCAAAAATTACGGGACGCCCGGATTCAAAAAGGCTATACGATTGATGATCTTCAACAGATCACCAA
GATTCAAAAACGCTACCTGATCGCGATCGAAGAAGGTAATTTTGATGCGCTGCCAGGCGACTTTTATGTGCGTGCCTTTA
TTAAACAATATGCTGACACTGTCGGCCTTGATGGGGATGCGTTGCTGACGCAATTCCAGCAGGACATCCCGGAACCTCAA
CCCCAAGAGTATGCAGCACAATCAGTTGAAAATAAGACTCGGGCAACCCGCGCCGAAGAAGCGAGTCCGGTTAACCGTTT
GCGGCGTTATTTACCGCAAATTGCGATTGCTGCAGTTGTTGTCGTGGCAGTCATTGTGATCTATGTCATCATGTTGGTTT
ACCAATCAGGACCCAAGCAAACGATCCCGACAGATTCAGAAAGTGTTGCGGTCTCATCGAAGCGTAGTACATCCAAGACT
TCGAAATCGTCGACATCTTCGAAAACAAGCAAGACATCAGCGGCTTCTAGTTCTTCGAAGACTGCGGAGAAGTCGTCCAA
GAAGAGTACTAAAAAGAGTTCGAAATTGGACATTTCTGTAGCGGATGCCAATGGTGCTACTCAGGCAGTTACTTTACAGA
ATCTGCCGAAGACGGGTAACAAGTTAACGCTTGGTGCAACCGGCGCTACTGCTTGGATTTCAGTGATTGTGAACGGCTCA
ACGACGTGGCAAGGTTCATTGACATCAGGTAATTCGCAAGAAGTGACATTGCCAGACAACGTCACGACATTCCAAGTGCG
GTCAGGCAATGCAACTGCGACCACCATCAAGCTCAATGGTCAGAGTGTTGATATCTCAAAGGGAACCAGCATCGTACGGA
CCATCACCTTCACAGCTGATGCAACAGAAAGTGAGGGTTCGCAAGAATGA

Upstream 100 bases:

>100_bases
GCTGGCGAATCTAGGAAACAAAGGATTTCTTAAGTCTTGCAGTTGGTTTTTCATGATATACTGAAAATGGTCAATAAAAA
ATAGCGGGTGAATAAAACTT

Downstream 100 bases:

>100_bases
ATCTTCCGAATAAATTAACGCTCATTCGAATTTTTCTGATTCCTGTTTTCACGATCCTGCTGGCACTTGATTGGCCGGCT
GGGTATCTGACACTTGCAGG

Product: Xre-like DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MDEIGQKLRDARIQKGYTIDDLQQITKIQKRYLIAIEEGNFDALPGDFYVRAFIKQYADTVGLDGDALLTQFQQDIPEPQ
PQEYAAQSVENKTRATRAEEASPVNRLRRYLPQIAIAAVVVVAVIVIYVIMLVYQSGPKQTIPTDSESVAVSSKRSTSKT
SKSSTSSKTSKTSAASSSSKTAEKSSKKSTKKSSKLDISVADANGATQAVTLQNLPKTGNKLTLGATGATAWISVIVNGS
TTWQGSLTSGNSQEVTLPDNVTTFQVRSGNATATTIKLNGQSVDISKGTSIVRTITFTADATESEGSQE

Sequences:

>Translated_309_residues
MDEIGQKLRDARIQKGYTIDDLQQITKIQKRYLIAIEEGNFDALPGDFYVRAFIKQYADTVGLDGDALLTQFQQDIPEPQ
PQEYAAQSVENKTRATRAEEASPVNRLRRYLPQIAIAAVVVVAVIVIYVIMLVYQSGPKQTIPTDSESVAVSSKRSTSKT
SKSSTSSKTSKTSAASSSSKTAEKSSKKSTKKSSKLDISVADANGATQAVTLQNLPKTGNKLTLGATGATAWISVIVNGS
TTWQGSLTSGNSQEVTLPDNVTTFQVRSGNATATTIKLNGQSVDISKGTSIVRTITFTADATESEGSQE
>Mature_309_residues
MDEIGQKLRDARIQKGYTIDDLQQITKIQKRYLIAIEEGNFDALPGDFYVRAFIKQYADTVGLDGDALLTQFQQDIPEPQ
PQEYAAQSVENKTRATRAEEASPVNRLRRYLPQIAIAAVVVVAVIVIYVIMLVYQSGPKQTIPTDSESVAVSSKRSTSKT
SKSSTSSKTSKTSAASSSSKTAEKSSKKSTKKSSKLDISVADANGATQAVTLQNLPKTGNKLTLGATGATAWISVIVNGS
TTWQGSLTSGNSQEVTLPDNVTTFQVRSGNATATTIKLNGQSVDISKGTSIVRTITFTADATESEGSQE

Specific function: Unknown

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33084; Mature: 33084

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEIGQKLRDARIQKGYTIDDLQQITKIQKRYLIAIEEGNFDALPGDFYVRAFIKQYADT
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHH
VGLDGDALLTQFQQDIPEPQPQEYAAQSVENKTRATRAEEASPVNRLRRYLPQIAIAAVV
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VVAVIVIYVIMLVYQSGPKQTIPTDSESVAVSSKRSTSKTSKSSTSSKTSKTSAASSSSK
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCHH
TAEKSSKKSTKKSSKLDISVADANGATQAVTLQNLPKTGNKLTLGATGATAWISVIVNGS
HHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCC
TTWQGSLTSGNSQEVTLPDNVTTFQVRSGNATATTIKLNGQSVDISKGTSIVRTITFTAD
CEEECCCCCCCCCEEECCCCCEEEEEECCCCEEEEEEECCCEEECCCCCEEEEEEEEECC
ATESEGSQE
CCCCCCCCC
>Mature Secondary Structure
MDEIGQKLRDARIQKGYTIDDLQQITKIQKRYLIAIEEGNFDALPGDFYVRAFIKQYADT
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHH
VGLDGDALLTQFQQDIPEPQPQEYAAQSVENKTRATRAEEASPVNRLRRYLPQIAIAAVV
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VVAVIVIYVIMLVYQSGPKQTIPTDSESVAVSSKRSTSKTSKSSTSSKTSKTSAASSSSK
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCHH
TAEKSSKKSTKKSSKLDISVADANGATQAVTLQNLPKTGNKLTLGATGATAWISVIVNGS
HHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCC
TTWQGSLTSGNSQEVTLPDNVTTFQVRSGNATATTIKLNGQSVDISKGTSIVRTITFTAD
CEEECCCCCCCCCEEECCCCCEEEEEECCCCEEEEEEECCCEEECCCCCEEEEEEEEECC
ATESEGSQE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]