Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is ytgP [H]

Identifier: 116494394

GI number: 116494394

Start: 861754

End: 863397

Strand: Direct

Name: ytgP [H]

Synonym: LSEI_0885

Alternate gene names: 116494394

Gene position: 861754-863397 (Clockwise)

Preceding gene: 116494393

Following gene: 116494395

Centisome position: 29.76

GC content: 46.78

Gene sequence:

>1644_bases
ATGGAGAATTCGCTGGGCAGCGGTAATCAACCGCAACGTTCAGATAAGGAAAAAATGATCCGCGGCTCGGCGTGGATGAC
TGCCGGCAGTGTTTTTTCGCGGATTTTAGGGGCCATTTATGTCATTCCATGGCGTATTTGGCTTGGAGCAGCGTTTCTAA
CTGCCAACGCTTTGTTTACAAAAGGTTATCAAATTTACAGTCTTTTTCTGATTATTTCGACTGCTGGTGTTCCTGGTGCT
GTTTCCAAACAGGTTGCCCGGTACAATGCTATGGGCGAATATAAAACCGGGATGCGTCTTTTTTACCACGGCACTTTTGC
CATGGTGCTGATGGGGATTGTTTCGTGTGGTGCCATGTGGCTGCTGTCGCCGCTTTTAGCAGCGGGTGACGCGCGCATGA
TACCGGTTTTTCGGTCACTGGCATGGCCGTTGCTGCTAATTCCGTCGCTTAGTTTGATTCGCGGGTTTTTCCAAGGTTAT
AACGAGATGGCGCCGAGTGCCATCAGTCAGTTTATTGAACAAGTGGCGCGAATTCTTTATATGTTAGTGATGACTTACGC
GATTATGGTGGCGGGTAACCACAGCTATCTGAGTGCGGTCATTCACTCCACCTTCGCCGCGTTCATCGGGGCCGTTTTCG
GACTTGGACTGTTAGTTGTTTATTTCCTCCGGCAAAAACCACGGTTGGATGCGTTGGTTGCCCAAAGTGCTAATTCCCTG
CAGATCAGTGTCAATGAGATTCTTTTAGATGTGGCACGGCAGGCGATTCCATTTATCATCATGGATTCAACGATTAATAT
TTACTACATCGTTGACCAGTACACATTTAATCCAATGATGAAGGCTTTTTATCTCGTTAGCGAAGATCAGCTTGACCGTT
TTTATGCGCTGTTTGCCGGAAACGCTAATAAACTGATTATGATCGTTGTTAGTCTGGCAGTTGCTATGGCCATTACCGTA
GTACCATTATTGGCAGGTGCGAAAACGCGCGGTGATGTTGAGGGATTGGCCCGGCAAATCACGAATACACTGCAGTTGTT
TTTTATCGTCATGATACCTTCGGCGTTGGGGATGGTGGCAGTCGCGCGCCCACTGTATGTTTTGTTCTATCGGGATATGG
ACTGGTTGGGCATTCGCTTGTTGCAGATTTCATCACTTTTAGCGATTATGCTGGGCTTGTTTACGGTTTTGGCAGCAATT
CTTCAGGGATTGTTCAATAACCGTCTTGCTATTCAAGAGATGCTGATTGGCTTGGCAGTTAAAGTGATTGTACAGTGGCC
AATGATTTTCTTCTTCAATGTTTACGGTCCGGTTTTGTCCACAATGTTAGGCATGACGGTCTCGAGTCTCCTAATGCTCT
ATTCAACGAATCGGATGTACAATATTCATGTACGCCAAACCATTCGCCGCGGCGTCGGTATTCTGGCCTTTTCCCTGATC
ATGTGCGCCGTTTGTTACCTGATTGTGAATGCATCAACCTTGGTGATCAATCCGCGGAGTCAGTTCGGGGCAGCGTTCGT
CTTGCTGATTGCAGTTGGGGTGGGCGTTTTGATTTACGTTTATTTGATTTTGAAAACGCGTTTGGCTGATTTAATCATTG
GTGAGCGAATTAGTCGACTTCGCGATATTTTACACATTCGGTGA

Upstream 100 bases:

>100_bases
AAGTTTTCTTTTGATTCCCGAAAGAAGCCCGGGAAAGATTGCAAGTCGCGCTGGGATTGCCTAAAATATAAAGGATTATG
CAACACGACAGGAGTTTATC

Downstream 100 bases:

>100_bases
GCTTATGCGATTAGATAAATATTTGAGTCATTTACAATTTGGTAGTCGAAAAGAAGTTAAGGCACTTATTCGCGACAAGC
GGGTACGTGTGGCCGGTGAT

Product: polysaccharide transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MENSLGSGNQPQRSDKEKMIRGSAWMTAGSVFSRILGAIYVIPWRIWLGAAFLTANALFTKGYQIYSLFLIISTAGVPGA
VSKQVARYNAMGEYKTGMRLFYHGTFAMVLMGIVSCGAMWLLSPLLAAGDARMIPVFRSLAWPLLLIPSLSLIRGFFQGY
NEMAPSAISQFIEQVARILYMLVMTYAIMVAGNHSYLSAVIHSTFAAFIGAVFGLGLLVVYFLRQKPRLDALVAQSANSL
QISVNEILLDVARQAIPFIIMDSTINIYYIVDQYTFNPMMKAFYLVSEDQLDRFYALFAGNANKLIMIVVSLAVAMAITV
VPLLAGAKTRGDVEGLARQITNTLQLFFIVMIPSALGMVAVARPLYVLFYRDMDWLGIRLLQISSLLAIMLGLFTVLAAI
LQGLFNNRLAIQEMLIGLAVKVIVQWPMIFFFNVYGPVLSTMLGMTVSSLLMLYSTNRMYNIHVRQTIRRGVGILAFSLI
MCAVCYLIVNASTLVINPRSQFGAAFVLLIAVGVGVLIYVYLILKTRLADLIIGERISRLRDILHIR

Sequences:

>Translated_547_residues
MENSLGSGNQPQRSDKEKMIRGSAWMTAGSVFSRILGAIYVIPWRIWLGAAFLTANALFTKGYQIYSLFLIISTAGVPGA
VSKQVARYNAMGEYKTGMRLFYHGTFAMVLMGIVSCGAMWLLSPLLAAGDARMIPVFRSLAWPLLLIPSLSLIRGFFQGY
NEMAPSAISQFIEQVARILYMLVMTYAIMVAGNHSYLSAVIHSTFAAFIGAVFGLGLLVVYFLRQKPRLDALVAQSANSL
QISVNEILLDVARQAIPFIIMDSTINIYYIVDQYTFNPMMKAFYLVSEDQLDRFYALFAGNANKLIMIVVSLAVAMAITV
VPLLAGAKTRGDVEGLARQITNTLQLFFIVMIPSALGMVAVARPLYVLFYRDMDWLGIRLLQISSLLAIMLGLFTVLAAI
LQGLFNNRLAIQEMLIGLAVKVIVQWPMIFFFNVYGPVLSTMLGMTVSSLLMLYSTNRMYNIHVRQTIRRGVGILAFSLI
MCAVCYLIVNASTLVINPRSQFGAAFVLLIAVGVGVLIYVYLILKTRLADLIIGERISRLRDILHIR
>Mature_547_residues
MENSLGSGNQPQRSDKEKMIRGSAWMTAGSVFSRILGAIYVIPWRIWLGAAFLTANALFTKGYQIYSLFLIISTAGVPGA
VSKQVARYNAMGEYKTGMRLFYHGTFAMVLMGIVSCGAMWLLSPLLAAGDARMIPVFRSLAWPLLLIPSLSLIRGFFQGY
NEMAPSAISQFIEQVARILYMLVMTYAIMVAGNHSYLSAVIHSTFAAFIGAVFGLGLLVVYFLRQKPRLDALVAQSANSL
QISVNEILLDVARQAIPFIIMDSTINIYYIVDQYTFNPMMKAFYLVSEDQLDRFYALFAGNANKLIMIVVSLAVAMAITV
VPLLAGAKTRGDVEGLARQITNTLQLFFIVMIPSALGMVAVARPLYVLFYRDMDWLGIRLLQISSLLAIMLGLFTVLAAI
LQGLFNNRLAIQEMLIGLAVKVIVQWPMIFFFNVYGPVLSTMLGMTVSSLLMLYSTNRMYNIHVRQTIRRGVGILAFSLI
MCAVCYLIVNASTLVINPRSQFGAAFVLLIAVGVGVLIYVYLILKTRLADLIIGERISRLRDILHIR

Specific function: May play a role in cell division, although it is not essential for growth [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Note=Localizes at the septum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 60624; Mature: 60624

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCC
>Mature Secondary Structure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HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]