| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494393
Identifier: 116494393
GI number: 116494393
Start: 861557
End: 861667
Strand: Direct
Name: 116494393
Synonym: LSEI_0884
Alternate gene names: NA
Gene position: 861557-861667 (Clockwise)
Preceding gene: 116494392
Following gene: 116494394
Centisome position: 29.76
GC content: 36.94
Gene sequence:
>111_bases TTGACCATTTTTTTAGCGATTCAGCTGCATGAAAAGTTTTGTATTTTTGGCGTTTCGATTGTGAGATTACTTGCTACGTG GCGGCTGGTAATTGTCAAAGTTTTCTTTTGA
Upstream 100 bases:
>100_bases CGCGAAAAATCGTGAATATTGTCGCAAAATAACCGCACTGGCTTCACCAATTAACTGAAAGAAAAAATGGTCAACGAATG GTTCCTGAAGGAAGCGGGCG
Downstream 100 bases:
>100_bases TTCCCGAAAGAAGCCCGGGAAAGATTGCAAGTCGCGCTGGGATTGCCTAAAATATAAAGGATTATGCAACACGACAGGAG TTTATCATGGAGAATTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 36; Mature: 35
Protein sequence:
>36_residues MTIFLAIQLHEKFCIFGVSIVRLLATWRLVIVKVFF
Sequences:
>Translated_36_residues MTIFLAIQLHEKFCIFGVSIVRLLATWRLVIVKVFF >Mature_35_residues TIFLAIQLHEKFCIFGVSIVRLLATWRLVIVKVFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4253; Mature: 4122
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIFLAIQLHEKFCIFGVSIVRLLATWRLVIVKVFF CEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure TIFLAIQLHEKFCIFGVSIVRLLATWRLVIVKVFF EEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA