| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is mfpsA [H]
Identifier: 116494377
GI number: 116494377
Start: 837890
End: 838918
Strand: Direct
Name: mfpsA [H]
Synonym: LSEI_0862
Alternate gene names: 116494377
Gene position: 837890-838918 (Clockwise)
Preceding gene: 116494376
Following gene: 116494378
Centisome position: 28.94
GC content: 44.51
Gene sequence:
>1029_bases ATGATTGTTATTAATATGTTTTCCTCTGCCAATAAGGTTGCAGGACAAGGAGTTGGCGCAGTCTACACAGAACTGATGGG CTTGCTGAAACACGATTTTTCAAATGAATTTGAAGTTAACGTCAATCGTTATACGCGTAGTGACATCAGCCATTATCATA CGATTGATCCTAAATTTTATTTATCTACTTTCTCCAAAAAACGGGGTCGCAAGATTGGCTTTGTCCACTTTGTGCCGAGT ACACTGGATGCGAGTCTGAAGTTGCCGCGAGTGGCGCGGTGGACGCTTGATAAGTATACGTTGGCTTTTTATAAGCGAAT GGATCAGTTAGTGGTGGTGAACCCGAATTTTATTCCTAAGTTAGAAGCTTATGGGATCAGTCGCGACAAAGTGACTTATA TTCCTAATTTCGTATCGCAACGAACGTTTCATCCAGTATCCACTGAAAAGCGGCAGGCTTTGCGACATGCCAATGGCTTT AAACCTGATGATTTTGTCATTTTTGGCGCAGGTCAGGTGCAGGATCGTAAGGGTGTCAGCGACTTTATCAAATTAGCAAA ACAAAATCCGGAATTTCGTTTTGTTTGGGCAGGTGGGTTCTCTTTTGGCCGCATTACTGAAGGCTACGACCATTTGAAGA AGGCCGTAGCAGAAGCCCCGGCAAACTTGGATTTTACCGGGATTATGCCACGGGAGACAATGATTGACTATTACAATATG GCCGATGTTTTCTTATTGCCTTCTTATGAAGAGCTGTTCCCAATGTCCGTCCTTGAGGCTTTTGCAACGGGAACGCCAGT GATGGTGCGGGATCTTGAGCTGTATCACCAAATCATCACACCTTATGCCATCACGGCTGTTGATGTTGACGATATGCAGT CTCGATTGCGGGCACTTGCGGATGATCATGATCTTTTGGCAACTTATGCAACTAAGAGTCGACAAGCTGCTGAAGTTTAC GATGAAAGCCGACTTGAAAAAGTCTGGCACGATTTCTATCTTCATCAAGCTGCACTGGGGAAGCACTAG
Upstream 100 bases:
>100_bases TCTATCAAGACATTTTGTCACACTATTCGCCTAATGAGGCCGATGAAGCTGCACCATGGACCGATGAAGATTCCAGTAAA CGGACCATGAAAGGTTAAAT
Downstream 100 bases:
>100_bases CCGAGGAGTTATATGACACGGAAGAACAAACTGGCTGTCTTAATCATGATTTTGATTGGCGCCGGTATTTTTATTTATGA AGCTCGTGATCTGAACGGCG
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MIVINMFSSANKVAGQGVGAVYTELMGLLKHDFSNEFEVNVNRYTRSDISHYHTIDPKFYLSTFSKKRGRKIGFVHFVPS TLDASLKLPRVARWTLDKYTLAFYKRMDQLVVVNPNFIPKLEAYGISRDKVTYIPNFVSQRTFHPVSTEKRQALRHANGF KPDDFVIFGAGQVQDRKGVSDFIKLAKQNPEFRFVWAGGFSFGRITEGYDHLKKAVAEAPANLDFTGIMPRETMIDYYNM ADVFLLPSYEELFPMSVLEAFATGTPVMVRDLELYHQIITPYAITAVDVDDMQSRLRALADDHDLLATYATKSRQAAEVY DESRLEKVWHDFYLHQAALGKH
Sequences:
>Translated_342_residues MIVINMFSSANKVAGQGVGAVYTELMGLLKHDFSNEFEVNVNRYTRSDISHYHTIDPKFYLSTFSKKRGRKIGFVHFVPS TLDASLKLPRVARWTLDKYTLAFYKRMDQLVVVNPNFIPKLEAYGISRDKVTYIPNFVSQRTFHPVSTEKRQALRHANGF KPDDFVIFGAGQVQDRKGVSDFIKLAKQNPEFRFVWAGGFSFGRITEGYDHLKKAVAEAPANLDFTGIMPRETMIDYYNM ADVFLLPSYEELFPMSVLEAFATGTPVMVRDLELYHQIITPYAITAVDVDDMQSRLRALADDHDLLATYATKSRQAAEVY DESRLEKVWHDFYLHQAALGKH >Mature_342_residues MIVINMFSSANKVAGQGVGAVYTELMGLLKHDFSNEFEVNVNRYTRSDISHYHTIDPKFYLSTFSKKRGRKIGFVHFVPS TLDASLKLPRVARWTLDKYTLAFYKRMDQLVVVNPNFIPKLEAYGISRDKVTYIPNFVSQRTFHPVSTEKRQALRHANGF KPDDFVIFGAGQVQDRKGVSDFIKLAKQNPEFRFVWAGGFSFGRITEGYDHLKKAVAEAPANLDFTGIMPRETMIDYYNM ADVFLLPSYEELFPMSVLEAFATGTPVMVRDLELYHQIITPYAITAVDVDDMQSRLRALADDHDLLATYATKSRQAAEVY DESRLEKVWHDFYLHQAALGKH
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR000368 [H]
Pfam domain/function: PF00534 Glycos_transf_1; PF00862 Sucrose_synth [H]
EC number: =2.4.1.246 [H]
Molecular weight: Translated: 39138; Mature: 39138
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVINMFSSANKVAGQGVGAVYTELMGLLKHDFSNEFEVNVNRYTRSDISHYHTIDPKFY CEEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCEECCCCHHH LSTFSKKRGRKIGFVHFVPSTLDASLKLPRVARWTLDKYTLAFYKRMDQLVVVNPNFIPK HHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC LEAYGISRDKVTYIPNFVSQRTFHPVSTEKRQALRHANGFKPDDFVIFGAGQVQDRKGVS HHHCCCCCCCEEECCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHH DFIKLAKQNPEFRFVWAGGFSFGRITEGYDHLKKAVAEAPANLDFTGIMPRETMIDYYNM HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHCC ADVFLLPSYEELFPMSVLEAFATGTPVMVRDLELYHQIITPYAITAVDVDDMQSRLRALA CCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHC DDHDLLATYATKSRQAAEVYDESRLEKVWHDFYLHQAALGKH CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIVINMFSSANKVAGQGVGAVYTELMGLLKHDFSNEFEVNVNRYTRSDISHYHTIDPKFY CEEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCEECCCCHHH LSTFSKKRGRKIGFVHFVPSTLDASLKLPRVARWTLDKYTLAFYKRMDQLVVVNPNFIPK HHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC LEAYGISRDKVTYIPNFVSQRTFHPVSTEKRQALRHANGFKPDDFVIFGAGQVQDRKGVS HHHCCCCCCCEEECCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHH DFIKLAKQNPEFRFVWAGGFSFGRITEGYDHLKKAVAEAPANLDFTGIMPRETMIDYYNM HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHCC ADVFLLPSYEELFPMSVLEAFATGTPVMVRDLELYHQIITPYAITAVDVDDMQSRLRALA CCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHC DDHDLLATYATKSRQAAEVYDESRLEKVWHDFYLHQAALGKH CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]