The gene/protein map for NC_008819 is currently unavailable.
Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

Click here to switch to the map view.

The map label for this gene is 116494359

Identifier: 116494359

GI number: 116494359

Start: 813067

End: 813381

Strand: Direct

Name: 116494359

Synonym: LSEI_0815

Alternate gene names: NA

Gene position: 813067-813381 (Clockwise)

Preceding gene: 116494355

Following gene: 116494360

Centisome position: 28.08

GC content: 45.4

Gene sequence:

>315_bases
ATGGCTGATAAATTTCAAGTTTTCGATTTAATTCAAGAAATCACACGGAATGACGGTAGTCGCTATTTTGAACTAGGTAA
CGTCATGATGAACGGTCGGGCGGAAAAGGCGGCTATGAAGGGGCTTATTAAACGTGTGCGGATCGTTCAACTAAACATTC
CCCATTCAACTGCTGTGACAGCTTACGAACAGTACATCAACGATCATTATGAATTCCCGTCAGCTGATTTGACGAGCTGG
GAAGAGTGGGACAAACCAGAAGGGCCGGTACGTCAGGCTTACCACGAGATTCTGAAGCAGAACCATGTTGGATGA

Upstream 100 bases:

>100_bases
GAAAAAAACATCATACCATAAACATAGCACCGCAAAGTAGCCGGGACAATTTTTAGAACACGACAAGCAGTGGCTAAATT
GATAAAGGAGTATGAAGAAC

Downstream 100 bases:

>100_bases
GTGGTGATATCGCTGGATCGTCAGCGACAGTAACAATTTAAACAAAACCTAACAAACACTGGCATTCACACTGGTAACGT
TGGCTTGGGTGATGCTAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MADKFQVFDLIQEITRNDGSRYFELGNVMMNGRAEKAAMKGLIKRVRIVQLNIPHSTAVTAYEQYINDHYEFPSADLTSW
EEWDKPEGPVRQAYHEILKQNHVG

Sequences:

>Translated_104_residues
MADKFQVFDLIQEITRNDGSRYFELGNVMMNGRAEKAAMKGLIKRVRIVQLNIPHSTAVTAYEQYINDHYEFPSADLTSW
EEWDKPEGPVRQAYHEILKQNHVG
>Mature_103_residues
ADKFQVFDLIQEITRNDGSRYFELGNVMMNGRAEKAAMKGLIKRVRIVQLNIPHSTAVTAYEQYINDHYEFPSADLTSWE
EWDKPEGPVRQAYHEILKQNHVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12098; Mature: 11967

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKFQVFDLIQEITRNDGSRYFELGNVMMNGRAEKAAMKGLIKRVRIVQLNIPHSTAVT
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCHHHHH
AYEQYINDHYEFPSADLTSWEEWDKPEGPVRQAYHEILKQNHVG
HHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADKFQVFDLIQEITRNDGSRYFELGNVMMNGRAEKAAMKGLIKRVRIVQLNIPHSTAVT
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCHHHHH
AYEQYINDHYEFPSADLTSWEEWDKPEGPVRQAYHEILKQNHVG
HHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA