Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494070

Identifier: 116494070

GI number: 116494070

Start: 514443

End: 514730

Strand: Direct

Name: 116494070

Synonym: LSEI_0512

Alternate gene names: NA

Gene position: 514443-514730 (Clockwise)

Preceding gene: 116494069

Following gene: 116494071

Centisome position: 17.77

GC content: 45.14

Gene sequence:

>288_bases
ATGGCTAATAAAGTGGAAAGGGAGTCGAATTCGACCCCCTTAACCAAGAAACAGAAAAGCTGTCAGTATTGCCAAGAGCC
GCATAAACCTATTGAAGCAGAAGATGGTAGTTTTCTGCGAATAGGTATGTCTGGTGGGAACTGTTGGGACGGAGTTCATC
CTGAAAAAATAAATGGTGCGGCAATACACACCTGCACCGCAGTCGGATTTGATAATGCTGAGGTTGATGAACCGATTGCA
ATCAATTATTGTCCGATGTGCGGACGTAGGCTGGAAGCAAAGCAATGA

Upstream 100 bases:

>100_bases
CGTGGCGGAACACAGCAATTGATCTTGTTGCCGAATACCTTAGTGAGAAGCTTGTAAAATTTAGCAAGCACGTGACAGTA
CTTGCGTAAGGAGACATAAC

Downstream 100 bases:

>100_bases
TTGCCGTCATCTTGCTCATCGCAGTTGCTTCAATATGGGCGTGGGCTAACTGGGAAAGAGGAAAATGAAATGAATTCGTT
ATTAATAAAGCTACTTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MANKVERESNSTPLTKKQKSCQYCQEPHKPIEAEDGSFLRIGMSGGNCWDGVHPEKINGAAIHTCTAVGFDNAEVDEPIA
INYCPMCGRRLEAKQ

Sequences:

>Translated_95_residues
MANKVERESNSTPLTKKQKSCQYCQEPHKPIEAEDGSFLRIGMSGGNCWDGVHPEKINGAAIHTCTAVGFDNAEVDEPIA
INYCPMCGRRLEAKQ
>Mature_94_residues
ANKVERESNSTPLTKKQKSCQYCQEPHKPIEAEDGSFLRIGMSGGNCWDGVHPEKINGAAIHTCTAVGFDNAEVDEPIAI
NYCPMCGRRLEAKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10453; Mature: 10322

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANKVERESNSTPLTKKQKSCQYCQEPHKPIEAEDGSFLRIGMSGGNCWDGVHPEKINGA
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCE
AIHTCTAVGFDNAEVDEPIAINYCPMCGRRLEAKQ
EEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
ANKVERESNSTPLTKKQKSCQYCQEPHKPIEAEDGSFLRIGMSGGNCWDGVHPEKINGA
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCE
AIHTCTAVGFDNAEVDEPIAINYCPMCGRRLEAKQ
EEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA