Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494071

Identifier: 116494071

GI number: 116494071

Start: 514800

End: 515132

Strand: Direct

Name: 116494071

Synonym: LSEI_0513

Alternate gene names: NA

Gene position: 514800-515132 (Clockwise)

Preceding gene: 116494070

Following gene: 116494072

Centisome position: 17.78

GC content: 37.54

Gene sequence:

>333_bases
ATGAATTCGTTATTAATAAAGCTACTTATTTGCGCGGTTATTACTGTAGTCATATGTGCATACTTCTTTTGGCTGCTTTT
TGATCATTTTGTTAGCAATAGGCGCAGCAAGACGGTTCAAATTGGCAGCACGGTCTTCATCGTCAGAATTGGCAAAAAGC
AATATGTATCTTACTTCAGCAAATGTAGCAAGGAATTTAATACATCAAGCGAAATTGATTCATCTAAACTATTTGTGCTA
AGGCATGACGCTGAAGCTGCTGCAGAAGTTTCTGGCGGGATTGTATTAACCTTGCCAATCAACATTGACGATCCAAACGA
ACTTAAATATTAG

Upstream 100 bases:

>100_bases
GTGCGGACGTAGGCTGGAAGCAAAGCAATGATTGCCGTCATCTTGCTCATCGCAGTTGCTTCAATATGGGCGTGGGCTAA
CTGGGAAAGAGGAAAATGAA

Downstream 100 bases:

>100_bases
CAGGAATAATCCTGATTCAATGTAAATAAAAAGCGCGCCTGATGAGGGACGCGCTGGAGGCCAGACGTACGATTGAGAGT
AAATGAAATCAAAGATTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNSLLIKLLICAVITVVICAYFFWLLFDHFVSNRRSKTVQIGSTVFIVRIGKKQYVSYFSKCSKEFNTSSEIDSSKLFVL
RHDAEAAAEVSGGIVLTLPINIDDPNELKY

Sequences:

>Translated_110_residues
MNSLLIKLLICAVITVVICAYFFWLLFDHFVSNRRSKTVQIGSTVFIVRIGKKQYVSYFSKCSKEFNTSSEIDSSKLFVL
RHDAEAAAEVSGGIVLTLPINIDDPNELKY
>Mature_110_residues
MNSLLIKLLICAVITVVICAYFFWLLFDHFVSNRRSKTVQIGSTVFIVRIGKKQYVSYFSKCSKEFNTSSEIDSSKLFVL
RHDAEAAAEVSGGIVLTLPINIDDPNELKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12427; Mature: 12427

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLLIKLLICAVITVVICAYFFWLLFDHFVSNRRSKTVQIGSTVFIVRIGKKQYVSYFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEECHHHHHHHHH
KCSKEFNTSSEIDSSKLFVLRHDAEAAAEVSGGIVLTLPINIDDPNELKY
HHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MNSLLIKLLICAVITVVICAYFFWLLFDHFVSNRRSKTVQIGSTVFIVRIGKKQYVSYFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEECHHHHHHHHH
KCSKEFNTSSEIDSSKLFVLRHDAEAAAEVSGGIVLTLPINIDDPNELKY
HHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA