| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494071
Identifier: 116494071
GI number: 116494071
Start: 514800
End: 515132
Strand: Direct
Name: 116494071
Synonym: LSEI_0513
Alternate gene names: NA
Gene position: 514800-515132 (Clockwise)
Preceding gene: 116494070
Following gene: 116494072
Centisome position: 17.78
GC content: 37.54
Gene sequence:
>333_bases ATGAATTCGTTATTAATAAAGCTACTTATTTGCGCGGTTATTACTGTAGTCATATGTGCATACTTCTTTTGGCTGCTTTT TGATCATTTTGTTAGCAATAGGCGCAGCAAGACGGTTCAAATTGGCAGCACGGTCTTCATCGTCAGAATTGGCAAAAAGC AATATGTATCTTACTTCAGCAAATGTAGCAAGGAATTTAATACATCAAGCGAAATTGATTCATCTAAACTATTTGTGCTA AGGCATGACGCTGAAGCTGCTGCAGAAGTTTCTGGCGGGATTGTATTAACCTTGCCAATCAACATTGACGATCCAAACGA ACTTAAATATTAG
Upstream 100 bases:
>100_bases GTGCGGACGTAGGCTGGAAGCAAAGCAATGATTGCCGTCATCTTGCTCATCGCAGTTGCTTCAATATGGGCGTGGGCTAA CTGGGAAAGAGGAAAATGAA
Downstream 100 bases:
>100_bases CAGGAATAATCCTGATTCAATGTAAATAAAAAGCGCGCCTGATGAGGGACGCGCTGGAGGCCAGACGTACGATTGAGAGT AAATGAAATCAAAGATTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MNSLLIKLLICAVITVVICAYFFWLLFDHFVSNRRSKTVQIGSTVFIVRIGKKQYVSYFSKCSKEFNTSSEIDSSKLFVL RHDAEAAAEVSGGIVLTLPINIDDPNELKY
Sequences:
>Translated_110_residues MNSLLIKLLICAVITVVICAYFFWLLFDHFVSNRRSKTVQIGSTVFIVRIGKKQYVSYFSKCSKEFNTSSEIDSSKLFVL RHDAEAAAEVSGGIVLTLPINIDDPNELKY >Mature_110_residues MNSLLIKLLICAVITVVICAYFFWLLFDHFVSNRRSKTVQIGSTVFIVRIGKKQYVSYFSKCSKEFNTSSEIDSSKLFVL RHDAEAAAEVSGGIVLTLPINIDDPNELKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12427; Mature: 12427
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLLIKLLICAVITVVICAYFFWLLFDHFVSNRRSKTVQIGSTVFIVRIGKKQYVSYFS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEECHHHHHHHHH KCSKEFNTSSEIDSSKLFVLRHDAEAAAEVSGGIVLTLPINIDDPNELKY HHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MNSLLIKLLICAVITVVICAYFFWLLFDHFVSNRRSKTVQIGSTVFIVRIGKKQYVSYFS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEECHHHHHHHHH KCSKEFNTSSEIDSSKLFVLRHDAEAAAEVSGGIVLTLPINIDDPNELKY HHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA