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The map label for this gene is ycaM [H]

Identifier: 116494030

GI number: 116494030

Start: 488439

End: 489881

Strand: Direct

Name: ycaM [H]

Synonym: LSEI_0471

Alternate gene names: 116494030

Gene position: 488439-489881 (Clockwise)

Preceding gene: 116494029

Following gene: 116494033

Centisome position: 16.87

GC content: 45.6

Gene sequence:

>1443_bases
GTGGCAGATACAAAGAAACAACTGCGCTGGTATAACGTGGCGTTAATTGCATTCGTCTCGGTCTGGGGCTTAGGCAATGT
GTTCAACAACTACGCTCAGCAAGGCCTTTCCGTCGTGACAAGCTGGATTTTGATCATGGCGATTTACTTTGTGCCATATG
CTTTGATTGTTGGTCAACTCGGCTCCACCTTTAAGGATCAAGCCGGTGGGGTTAGCTCGTGGATCAAAGAAACCGGTACG
GTCAGGTTGGCCTATTATGCTGCTTGGACCTATTGGGTTGTTCATATTCCATACTTAGCTCAAAAGCCGCAAGCCATTCT
GATTGCGTTGAGCTGGTTGTTTAAAGGCAACGGCAATTTCGTGAATACCGTCTCTTCAATGACCGTATCCTTAATTTGTT
TAGCACTCTTCTTGCTATTTTTATGGCTGTCGTCACGTGGGTTAACCACTTTGAATCGCATTGGCAGTATGGCAGGTACG
GCGATGTTCTTGATGTCGATTTTGTTTATCATTTTGGCTGTCACTGCACCGCTCATGGTCAAAGGCGTGCATGTGGCCAC
ACCGGATATGGGCGACATTCATACCTACTTGCCGAAGTTTGATCTGAATTACTTCACCACCATTTCGATGCTGGTTTTTG
CGGTTGGCGGTGCGGAAAAAATTTCTCCGTACGTCAATAACACGAAACATGCGGCAAAGGAATTTCCAACGGGGATGCTG
GTGCTTGCCGGGATGGTTGCCTTTTGTGCCTTGCTCGGGTCATTTGGCATGGGCATGTTGTTTAACAGTAACCAGATTCC
CACTGATTTAATGGCCAATGGACCGTATACCGCCTTCGCAATGCTGGGCAGTTATTATCATGTTGGCAATATTTTCGTCA
TTCTCTATGCCATCGCCAACGCACTCGCTTCCATTTCGGCCTTAGCCTTTTCGATTGATGCACCGTTGAAAATGCTGCTA
AGTGATGCTGATCCGCATTTTATTCCAAAGAAGCTGAGTCATCTGAATAAAAAAGGCACGCCGATCAATGGTTACTGGCT
GACCGGGATTTTAGTCAGTTTGCTGATCATTGTGCCAGCGCTTGGTATCGGCAATATGAACGAGCTGTATAAGTGGTTGT
TAAATCTGAACTCAGTCGTGATGCCATTACGCTACTTGTGGGTTTTCCTTGCCTATTATTTGCTTAATAAGCATTTGGAA
AAATTCCAAGCAGAGTACATGTTTGTTAAAAACAAACATGTGGGCATGATTATTGGCGGTTGGTGTTTTCTTTTTACCGC
ATTGGCCTGCTTGTTGGGAATGTTGCCGAAAATCAATTATCTCAACGATCCAGGGACTTGGTGGTTCCAGATGGGCTTAA
ACATCATTACGCCAGTTATTTTCCTGGCATTGGGACTTATTTTGCCGTTCATTGCGCGACGGGATGAAGCTCGGTTACTT
TAG

Upstream 100 bases:

>100_bases
ATCTATACAATTTCACGGGAAAGAAAACGGGTTAAACCGGTACACTAAAAAATGAGTCGCTGTTGATTGATGGACAGGCG
GCTGTTTGGAGGGATTTTTA

Downstream 100 bases:

>100_bases
TAAATAAAAATTGATCATAGTAAAAAAAGTCTGTGTTGGCATGCCGAAGATTTCGGTTGTCAGCACAGACTTTTTAGTTA
GCGGTTTTTACATTGAAGTT

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MADTKKQLRWYNVALIAFVSVWGLGNVFNNYAQQGLSVVTSWILIMAIYFVPYALIVGQLGSTFKDQAGGVSSWIKETGT
VRLAYYAAWTYWVVHIPYLAQKPQAILIALSWLFKGNGNFVNTVSSMTVSLICLALFLLFLWLSSRGLTTLNRIGSMAGT
AMFLMSILFIILAVTAPLMVKGVHVATPDMGDIHTYLPKFDLNYFTTISMLVFAVGGAEKISPYVNNTKHAAKEFPTGML
VLAGMVAFCALLGSFGMGMLFNSNQIPTDLMANGPYTAFAMLGSYYHVGNIFVILYAIANALASISALAFSIDAPLKMLL
SDADPHFIPKKLSHLNKKGTPINGYWLTGILVSLLIIVPALGIGNMNELYKWLLNLNSVVMPLRYLWVFLAYYLLNKHLE
KFQAEYMFVKNKHVGMIIGGWCFLFTALACLLGMLPKINYLNDPGTWWFQMGLNIITPVIFLALGLILPFIARRDEARLL

Sequences:

>Translated_480_residues
MADTKKQLRWYNVALIAFVSVWGLGNVFNNYAQQGLSVVTSWILIMAIYFVPYALIVGQLGSTFKDQAGGVSSWIKETGT
VRLAYYAAWTYWVVHIPYLAQKPQAILIALSWLFKGNGNFVNTVSSMTVSLICLALFLLFLWLSSRGLTTLNRIGSMAGT
AMFLMSILFIILAVTAPLMVKGVHVATPDMGDIHTYLPKFDLNYFTTISMLVFAVGGAEKISPYVNNTKHAAKEFPTGML
VLAGMVAFCALLGSFGMGMLFNSNQIPTDLMANGPYTAFAMLGSYYHVGNIFVILYAIANALASISALAFSIDAPLKMLL
SDADPHFIPKKLSHLNKKGTPINGYWLTGILVSLLIIVPALGIGNMNELYKWLLNLNSVVMPLRYLWVFLAYYLLNKHLE
KFQAEYMFVKNKHVGMIIGGWCFLFTALACLLGMLPKINYLNDPGTWWFQMGLNIITPVIFLALGLILPFIARRDEARLL
>Mature_479_residues
ADTKKQLRWYNVALIAFVSVWGLGNVFNNYAQQGLSVVTSWILIMAIYFVPYALIVGQLGSTFKDQAGGVSSWIKETGTV
RLAYYAAWTYWVVHIPYLAQKPQAILIALSWLFKGNGNFVNTVSSMTVSLICLALFLLFLWLSSRGLTTLNRIGSMAGTA
MFLMSILFIILAVTAPLMVKGVHVATPDMGDIHTYLPKFDLNYFTTISMLVFAVGGAEKISPYVNNTKHAAKEFPTGMLV
LAGMVAFCALLGSFGMGMLFNSNQIPTDLMANGPYTAFAMLGSYYHVGNIFVILYAIANALASISALAFSIDAPLKMLLS
DADPHFIPKKLSHLNKKGTPINGYWLTGILVSLLIIVPALGIGNMNELYKWLLNLNSVVMPLRYLWVFLAYYLLNKHLEK
FQAEYMFVKNKHVGMIIGGWCFLFTALACLLGMLPKINYLNDPGTWWFQMGLNIITPVIFLALGLILPFIARRDEARLL

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081798, Length=474, Percent_Identity=58.6497890295359, Blast_Score=579, Evalue=1e-166,
Organism=Escherichia coli, GI48994921, Length=424, Percent_Identity=27.122641509434, Blast_Score=125, Evalue=8e-30,
Organism=Escherichia coli, GI87082380, Length=443, Percent_Identity=23.0248306997743, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787768, Length=424, Percent_Identity=22.877358490566, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 53253; Mature: 53122

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure 
ADTKKQLRWYNVALIAFVSVWGLGNVFNNYAQQGLSVVTSWILIMAIYFVPYALIVGQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSTFKDQAGGVSSWIKETGTVRLAYYAAWTYWVVHIPYLAQKPQAILIALSWLFKGNGNF
CCHHHHHCCCHHHHHHHCCCEEEHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCH
VNTVSSMTVSLICLALFLLFLWLSSRGLTTLNRIGSMAGTAMFLMSILFIILAVTAPLMV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGVHVATPDMGDIHTYLPKFDLNYFTTISMLVFAVGGAEKISPYVNNTKHAAKEFPTGML
CCCEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCHHHCCHHHHHHHCCCHHH
VLAGMVAFCALLGSFGMGMLFNSNQIPTDLMANGPYTAFAMLGSYYHVGNIFVILYAIAN
HHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALASISALAFSIDAPLKMLLSDADPHFIPKKLSHLNKKGTPINGYWLTGILVSLLIIVPA
HHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHC
LGIGNMNELYKWLLNLNSVVMPLRYLWVFLAYYLLNKHLEKFQAEYMFVKNKHVGMIIGG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHH
WCFLFTALACLLGMLPKINYLNDPGTWWFQMGLNIITPVIFLALGLILPFIARRDEARLL
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]