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The map label for this gene is licR [H]

Identifier: 116494015

GI number: 116494015

Start: 456053

End: 457963

Strand: Direct

Name: licR [H]

Synonym: LSEI_0453

Alternate gene names: 116494015

Gene position: 456053-457963 (Clockwise)

Preceding gene: 116494008

Following gene: 116494017

Centisome position: 15.75

GC content: 40.29

Gene sequence:

>1911_bases
ATGCTAAATAACAACCAGCAACGGCTATTGCAACTGTTATTCGAATCCAATCAACCACTGACGGCTAATCAGTTATCAGA
GAAGCTCGGTTGTTCAGTGCGAACTGCCAAAACTTATGTTGCGCAGATTAATCGATTAGCCGCGGAGCCACTGATTCTAT
CGTCACGACAAGGTTACGTGGCTTTAAAAACTGAGGCTAAACAATTACTAATTTCAACAAACAATGCAAGTGATATCCCA
CAAACCTTTCGTGATCGTGCTTTTTACATCATCAAACAAAGCATGATTCATAAGGCGCAATTGGATGTCTTTGACTTGGA
GGAAAGCTTATTTGTTAGCTATGGAACTTTAAAAAATGATATTCAAAAGATCAATCAGATGTTTTCGAAATCTGGCGTTA
GGGTAGTCATTCGCGATAATAAAATTCAGGTTACCGGAAATGAAAAAGCCAAACGCCGACTGATTTCGCATTTCATTATG
GAGGAAGCACCTCATCATTTCGTTGATCGATCCTTGCTCACACAAAACTTTAATCGTACCGATGTTGAACAGATCGAGCA
AATTATCAAAGAAGAATTAGCGCCATCAACATTAAAACTCAATTATTATGCATTGATAAATCTCATGATGCATTTATTGA
TTATGATTCAATCCTTACATCACGACGATACATTGCTATCCCGTGATGCCTATAGTTCATGGCTAAACACGTATGATGCG
GCTATTGTCACGAAAATTATTAAACGTATTGAGAACGTTTTTAACCTTATTTTAAATAAACATGAGCGTGAAGAGATCCA
CATGTTGTTTCATGCTAATGTTGACCATTTACCGCTAAGTGATCGTGACAAGTTAACCACAACTGTTGGTGACAACATTG
TGCGAGCGATGAGCTCATTATTTGCAGAAGTCCAACACATATTTGGGATTGATCTAGATAACGATTATTTCGTTTTTCCG
TTCAGCTTGCATCTCAACAAATTATTTTCTCGCGCCATGCAGGGATCCAGTCTGAACAGTCCGCTAACCGAATCTTTAAA
GCAGGATTTTCCGGTAGTTTTTGAGCTGGCAGTTTTTGTTTCTTTTCGGCTTAGTCAATTGTTGCACATTCCAATCACGG
AAGGCGAACGAGCATATATTGCACTGCATATTGGTGCTGAATTAGATCGCCAAAAGCAACACTCTGAAAAAATCAGAACA
GCTATTTTTTCACCGAACTATATGAATTTGAACACGCAACTGTATCAGCATGTTTCTAAGCAATTTGAGCATGATTTGAA
TGTTGTTGCCTTGGTGAATGACCCTTCTGAGCTTGATAAGCTCGATGTTTCGCTGCTTATCACGACAGTACCTCAGGCTT
CATCGATGGCTTATCGAGTCGTGACAATTTCGCCTTTCATGACGAGTAAAGAGAAAAGCACCATCATGGCGACAATTGAG
GAACATCGTCGTAACGTACAAAGGGATTTTTTAAGACGCTATTTTGATATCTACTTCGGTGAGCAATTCTTCTTTACATT
GCAGCCAATCATGCAACGGGATCAAGTTGTGACCTTGATGTGTGATCAACTGGAGCACCGCCATATTGTGTCTCCAAGTT
TTCGACAGCATGTTTTTGAACGTGAAGAAGCGGCTGGTACTGCTTTTGGGACGGTCGCTCTGCCACATTCTGTGTACATG
GAAGCAAGGCAGACAACTTTTAGTGTCGGCATAGCGAAAAACTCAATTCGTTGGGGAGAGCGACGTGTCAATATTGTCGT
TCTTGCAGCTATTAGTCAAAATGATCAACAGCGCTTTATGCGTTTGTATGAAGCCTTAATCACGATGTTCAGTGAACCGC
AAGTGGCGACTGCGCTTGCACGCGTTAGGAATTTTGAACAATTTAAAAATGTCGTCAAAACAAACATGTGA

Upstream 100 bases:

>100_bases
ACAGTGCAAATGGTTGACGAATTGTTAGCGGTTGCGTGCAAGCAATAGGCTTTTTTGAATTTTGGGAGAACCGGTTATAA
AAAGACCGGAAGGGAGCAAG

Downstream 100 bases:

>100_bases
GGTGGCTTATTGCCCTAGTTTTTATAACATGATGTGTCAGCATACTGGGCCTAAATTAAAAAGTGGTTGACCACATTAGC
AACAAGCTAATGTGGTCAAC

Product: transcriptional antiterminator

Products: NA

Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MLNNNQQRLLQLLFESNQPLTANQLSEKLGCSVRTAKTYVAQINRLAAEPLILSSRQGYVALKTEAKQLLISTNNASDIP
QTFRDRAFYIIKQSMIHKAQLDVFDLEESLFVSYGTLKNDIQKINQMFSKSGVRVVIRDNKIQVTGNEKAKRRLISHFIM
EEAPHHFVDRSLLTQNFNRTDVEQIEQIIKEELAPSTLKLNYYALINLMMHLLIMIQSLHHDDTLLSRDAYSSWLNTYDA
AIVTKIIKRIENVFNLILNKHEREEIHMLFHANVDHLPLSDRDKLTTTVGDNIVRAMSSLFAEVQHIFGIDLDNDYFVFP
FSLHLNKLFSRAMQGSSLNSPLTESLKQDFPVVFELAVFVSFRLSQLLHIPITEGERAYIALHIGAELDRQKQHSEKIRT
AIFSPNYMNLNTQLYQHVSKQFEHDLNVVALVNDPSELDKLDVSLLITTVPQASSMAYRVVTISPFMTSKEKSTIMATIE
EHRRNVQRDFLRRYFDIYFGEQFFFTLQPIMQRDQVVTLMCDQLEHRHIVSPSFRQHVFEREEAAGTAFGTVALPHSVYM
EARQTTFSVGIAKNSIRWGERRVNIVVLAAISQNDQQRFMRLYEALITMFSEPQVATALARVRNFEQFKNVVKTNM

Sequences:

>Translated_636_residues
MLNNNQQRLLQLLFESNQPLTANQLSEKLGCSVRTAKTYVAQINRLAAEPLILSSRQGYVALKTEAKQLLISTNNASDIP
QTFRDRAFYIIKQSMIHKAQLDVFDLEESLFVSYGTLKNDIQKINQMFSKSGVRVVIRDNKIQVTGNEKAKRRLISHFIM
EEAPHHFVDRSLLTQNFNRTDVEQIEQIIKEELAPSTLKLNYYALINLMMHLLIMIQSLHHDDTLLSRDAYSSWLNTYDA
AIVTKIIKRIENVFNLILNKHEREEIHMLFHANVDHLPLSDRDKLTTTVGDNIVRAMSSLFAEVQHIFGIDLDNDYFVFP
FSLHLNKLFSRAMQGSSLNSPLTESLKQDFPVVFELAVFVSFRLSQLLHIPITEGERAYIALHIGAELDRQKQHSEKIRT
AIFSPNYMNLNTQLYQHVSKQFEHDLNVVALVNDPSELDKLDVSLLITTVPQASSMAYRVVTISPFMTSKEKSTIMATIE
EHRRNVQRDFLRRYFDIYFGEQFFFTLQPIMQRDQVVTLMCDQLEHRHIVSPSFRQHVFEREEAAGTAFGTVALPHSVYM
EARQTTFSVGIAKNSIRWGERRVNIVVLAAISQNDQQRFMRLYEALITMFSEPQVATALARVRNFEQFKNVVKTNM
>Mature_636_residues
MLNNNQQRLLQLLFESNQPLTANQLSEKLGCSVRTAKTYVAQINRLAAEPLILSSRQGYVALKTEAKQLLISTNNASDIP
QTFRDRAFYIIKQSMIHKAQLDVFDLEESLFVSYGTLKNDIQKINQMFSKSGVRVVIRDNKIQVTGNEKAKRRLISHFIM
EEAPHHFVDRSLLTQNFNRTDVEQIEQIIKEELAPSTLKLNYYALINLMMHLLIMIQSLHHDDTLLSRDAYSSWLNTYDA
AIVTKIIKRIENVFNLILNKHEREEIHMLFHANVDHLPLSDRDKLTTTVGDNIVRAMSSLFAEVQHIFGIDLDNDYFVFP
FSLHLNKLFSRAMQGSSLNSPLTESLKQDFPVVFELAVFVSFRLSQLLHIPITEGERAYIALHIGAELDRQKQHSEKIRT
AIFSPNYMNLNTQLYQHVSKQFEHDLNVVALVNDPSELDKLDVSLLITTVPQASSMAYRVVTISPFMTSKEKSTIMATIE
EHRRNVQRDFLRRYFDIYFGEQFFFTLQPIMQRDQVVTLMCDQLEHRHIVSPSFRQHVFEREEAAGTAFGTVALPHSVYM
EARQTTFSVGIAKNSIRWGERRVNIVVLAAISQNDQQRFMRLYEALITMFSEPQVATALARVRNFEQFKNVVKTNM

Specific function: Positive regulator of the licABCH operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR007737
- InterPro:   IPR011608
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR013011
- InterPro:   IPR003501
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 73466; Mature: 73466

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS51094 PTS_EIIA_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNNNQQRLLQLLFESNQPLTANQLSEKLGCSVRTAKTYVAQINRLAAEPLILSSRQGYV
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCCEE
ALKTEAKQLLISTNNASDIPQTFRDRAFYIIKQSMIHKAQLDVFDLEESLFVSYGTLKND
EEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHH
IQKINQMFSKSGVRVVIRDNKIQVTGNEKAKRRLISHFIMEEAPHHFVDRSLLTQNFNRT
HHHHHHHHHCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
DVEQIEQIIKEELAPSTLKLNYYALINLMMHLLIMIQSLHHDDTLLSRDAYSSWLNTYDA
CHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AIVTKIIKRIENVFNLILNKHEREEIHMLFHANVDHLPLSDRDKLTTTVGDNIVRAMSSL
HHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FAEVQHIFGIDLDNDYFVFPFSLHLNKLFSRAMQGSSLNSPLTESLKQDFPVVFELAVFV
HHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHH
SFRLSQLLHIPITEGERAYIALHIGAELDRQKQHSEKIRTAIFSPNYMNLNTQLYQHVSK
HHHHHHHEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
QFEHDLNVVALVNDPSELDKLDVSLLITTVPQASSMAYRVVTISPFMTSKEKSTIMATIE
HHHCCCCEEEEECCCHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
EHRRNVQRDFLRRYFDIYFGEQFFFTLQPIMQRDQVVTLMCDQLEHRHIVSPSFRQHVFE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
REEAAGTAFGTVALPHSVYMEARQTTFSVGIAKNSIRWGERRVNIVVLAAISQNDQQRFM
HHHHCCCEEEHHHCCHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEEEEEECCCHHHHHH
RLYEALITMFSEPQVATALARVRNFEQFKNVVKTNM
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNNNQQRLLQLLFESNQPLTANQLSEKLGCSVRTAKTYVAQINRLAAEPLILSSRQGYV
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCCEE
ALKTEAKQLLISTNNASDIPQTFRDRAFYIIKQSMIHKAQLDVFDLEESLFVSYGTLKND
EEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHH
IQKINQMFSKSGVRVVIRDNKIQVTGNEKAKRRLISHFIMEEAPHHFVDRSLLTQNFNRT
HHHHHHHHHCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
DVEQIEQIIKEELAPSTLKLNYYALINLMMHLLIMIQSLHHDDTLLSRDAYSSWLNTYDA
CHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AIVTKIIKRIENVFNLILNKHEREEIHMLFHANVDHLPLSDRDKLTTTVGDNIVRAMSSL
HHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FAEVQHIFGIDLDNDYFVFPFSLHLNKLFSRAMQGSSLNSPLTESLKQDFPVVFELAVFV
HHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHH
SFRLSQLLHIPITEGERAYIALHIGAELDRQKQHSEKIRTAIFSPNYMNLNTQLYQHVSK
HHHHHHHEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
QFEHDLNVVALVNDPSELDKLDVSLLITTVPQASSMAYRVVTISPFMTSKEKSTIMATIE
HHHCCCCEEEEECCCHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
EHRRNVQRDFLRRYFDIYFGEQFFFTLQPIMQRDQVVTLMCDQLEHRHIVSPSFRQHVFE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
REEAAGTAFGTVALPHSVYMEARQTTFSVGIAKNSIRWGERRVNIVVLAAISQNDQQRFM
HHHHCCCEEEHHHCCHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEEEEEECCCHHHHHH
RLYEALITMFSEPQVATALARVRNFEQFKNVVKTNM
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377; 10438772 [H]