| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is glvC [H]
Identifier: 116493937
GI number: 116493937
Start: 371277
End: 373157
Strand: Direct
Name: glvC [H]
Synonym: LSEI_0370
Alternate gene names: 116493937
Gene position: 371277-373157 (Clockwise)
Preceding gene: 116493936
Following gene: 116493938
Centisome position: 12.82
GC content: 43.75
Gene sequence:
>1881_bases ATGCAAAAACTTCAGCGTTTCGGTGCCGCTATGTTTACCCCGGTCCTACTTTTCACATTTGCGGGGATTATGACCGCAAT TTGTATTCTAATGACAAATGAGCAGATCTTTGGCAGTATGGCTGCACCAGGTACTAATTGGTACGGTGTGTGGCAAACAC TGCAAGCGGGTGCCTTTACGGTGTTCAACATTATTCCCCTATTATTCGTTGTTGGTCTGCCAATCGGGTTGGCAAAACAA GCGCCAGGTCGTGCTGCGATGGAAGCAGTTGTCATCTATGCATCATGGAATTACATGATAAATGCCATCCTAACAAATTG GGAAACCGCCTTTGGTTTCAAGAACTTTGCCAAAATGGAGATTGTCGCTAATTCAACAAACCAAGGATTAACCAATATTA TTGGAATAAAGACACTTGATACGAGTATTGTGGGTGCCTTGATTGTTGCGGGAATTGTCGTTTGGTTGCACAACCGCTAT TTCGATACAAAACTGCCTGACTGGCTAGGCACTTTCCAAGGGTCTTCGTACATCGTTATCTTAGGTCTCTTCATTATGAT TCCACTGGCTGTTTTAACTTGTTTCTTTTGGCCTAAGGTTCAGATGGGGATTTCAGCATTACAAGGCTTTATGAAAGCTT CAGGTGTTTTTGGGATTTGGGTCTATGCCTTCTTGGAGCGAGTTTTGATTCCAACAGGCTTGCATCATTTTATTTATATT CCTTTTGAATATGGACCTGCTGCCGTTTCTGGTGGTCTAAAGGCATGGTGGTTTGCTAACTTAAATACACTTGGCCAATC AACACGTCCGATTAAAGAACTGGCACCATTGATGGGCTTTGAAGGTTATGGATTCGAAAAGGTCTTCGGTATGCTTGGCA TTGGCCTAGGCTTGTATGCAACCGCAAAACCGTCTAAGAAAAAAGAAACTGCTGCCTTACTGATTCCCGCTGTATTGACA GGTATGTTTGCTGGTATCACAGAACCAGTTGAGTTTACTTTTCTATTTGCAGCACCAGTACTCTGGTTTGTGCACGCCTT TCTAGCAGCAACAATGGATGCCATTATGTTTGCAGTTGGTGTTGTGGGTGAATTCAGTGGAGGCCTGATTGGATGGGCAT CTGAAAACTGGATTCCGCTTTGGAATCATCAGTGGAAAACTTATTTGTTGCAGATTGCGATTGGATTGGTTTTTGTCGTC ATTTATTACGTTGCGTTTAAATATCTTATCCTAAAGTTCAATTTTGTAACACCGGGTCGTGAACCAGAAGATCAATCAGC CAAATTAATGACGAAGAAAGAATACAAAGCCGCAAAAGCCGCTGAAAAAGGCGCTTCACCTGCAGCAACAGATCCTTATA CCCAACGAGCAATTGCTTATCTTAGCGCACTCGGTGGTTCAGATAATATTAAAGAAATGACCAGTTGTGCGACTCGATTG CGTGTAACGGTTAATGACGAAACTAAGGTTGCACCCGATGCTGAATTTAAAGCTAACAAAGCAGTTAATGTTGTCCATCA TGGCAAGGCTTTGCAGGTGATTGTTGGGCTTGATGTGCCACAGGTTCTTGAAAAGATTCAAGGACTCCTTGACGATCAGG ACGCGGTGAAGACATCGACAGTGACGCAACCGGTTGATGATTCACCAGAGTCTCAGACAGCGGCACTCCTTAGTGATTCA TTGGGAACAGGTGCAAACGTACAAAGCGCTATAGCACAGAAAAACACGGTTGTAGCTAAAGTAAACGACCCGAGTTTAGT CGATCCAGCCAGCGTGTTTAAGTCACTAGGAATTGGTGTGAAAGATGTGCAAATCGACGGGACGACTGTAACGATCACAT TCTCAGAAATGTCAGACATTGCCAACCGCATCATGGCGTAA
Upstream 100 bases:
>100_bases AGCAAGAGCGAGAATTAATCGAAATAAGTTAATTACTCGCTCTTTTCTTTCAAAACAAAAGTAAGGGCATACATTACAGA AAGTGAGATGAGCTTCAATG
Downstream 100 bases:
>100_bases ACGCTTGCATGATATAATCAGGTAAATCAGTTCATGAGAGAAGGCAGCATTGTGAAACTAGAATCCCTGATTAATCAGAA ATATAGCAATTTAAATCAAA
Product: N-acetylglucosamine and glucose PTS, EIICBA
Products: NA
Alternate protein names: Maltose permease IIC component; PTS system maltose-specific EIIC component; Maltose-specific phosphotransferase enzyme IIB component; PTS system maltose-specific EIIB component [H]
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MQKLQRFGAAMFTPVLLFTFAGIMTAICILMTNEQIFGSMAAPGTNWYGVWQTLQAGAFTVFNIIPLLFVVGLPIGLAKQ APGRAAMEAVVIYASWNYMINAILTNWETAFGFKNFAKMEIVANSTNQGLTNIIGIKTLDTSIVGALIVAGIVVWLHNRY FDTKLPDWLGTFQGSSYIVILGLFIMIPLAVLTCFFWPKVQMGISALQGFMKASGVFGIWVYAFLERVLIPTGLHHFIYI PFEYGPAAVSGGLKAWWFANLNTLGQSTRPIKELAPLMGFEGYGFEKVFGMLGIGLGLYATAKPSKKKETAALLIPAVLT GMFAGITEPVEFTFLFAAPVLWFVHAFLAATMDAIMFAVGVVGEFSGGLIGWASENWIPLWNHQWKTYLLQIAIGLVFVV IYYVAFKYLILKFNFVTPGREPEDQSAKLMTKKEYKAAKAAEKGASPAATDPYTQRAIAYLSALGGSDNIKEMTSCATRL RVTVNDETKVAPDAEFKANKAVNVVHHGKALQVIVGLDVPQVLEKIQGLLDDQDAVKTSTVTQPVDDSPESQTAALLSDS LGTGANVQSAIAQKNTVVAKVNDPSLVDPASVFKSLGIGVKDVQIDGTTVTITFSEMSDIANRIMA
Sequences:
>Translated_626_residues MQKLQRFGAAMFTPVLLFTFAGIMTAICILMTNEQIFGSMAAPGTNWYGVWQTLQAGAFTVFNIIPLLFVVGLPIGLAKQ APGRAAMEAVVIYASWNYMINAILTNWETAFGFKNFAKMEIVANSTNQGLTNIIGIKTLDTSIVGALIVAGIVVWLHNRY FDTKLPDWLGTFQGSSYIVILGLFIMIPLAVLTCFFWPKVQMGISALQGFMKASGVFGIWVYAFLERVLIPTGLHHFIYI PFEYGPAAVSGGLKAWWFANLNTLGQSTRPIKELAPLMGFEGYGFEKVFGMLGIGLGLYATAKPSKKKETAALLIPAVLT GMFAGITEPVEFTFLFAAPVLWFVHAFLAATMDAIMFAVGVVGEFSGGLIGWASENWIPLWNHQWKTYLLQIAIGLVFVV IYYVAFKYLILKFNFVTPGREPEDQSAKLMTKKEYKAAKAAEKGASPAATDPYTQRAIAYLSALGGSDNIKEMTSCATRL RVTVNDETKVAPDAEFKANKAVNVVHHGKALQVIVGLDVPQVLEKIQGLLDDQDAVKTSTVTQPVDDSPESQTAALLSDS LGTGANVQSAIAQKNTVVAKVNDPSLVDPASVFKSLGIGVKDVQIDGTTVTITFSEMSDIANRIMA >Mature_626_residues MQKLQRFGAAMFTPVLLFTFAGIMTAICILMTNEQIFGSMAAPGTNWYGVWQTLQAGAFTVFNIIPLLFVVGLPIGLAKQ APGRAAMEAVVIYASWNYMINAILTNWETAFGFKNFAKMEIVANSTNQGLTNIIGIKTLDTSIVGALIVAGIVVWLHNRY FDTKLPDWLGTFQGSSYIVILGLFIMIPLAVLTCFFWPKVQMGISALQGFMKASGVFGIWVYAFLERVLIPTGLHHFIYI PFEYGPAAVSGGLKAWWFANLNTLGQSTRPIKELAPLMGFEGYGFEKVFGMLGIGLGLYATAKPSKKKETAALLIPAVLT GMFAGITEPVEFTFLFAAPVLWFVHAFLAATMDAIMFAVGVVGEFSGGLIGWASENWIPLWNHQWKTYLLQIAIGLVFVV IYYVAFKYLILKFNFVTPGREPEDQSAKLMTKKEYKAAKAAEKGASPAATDPYTQRAIAYLSALGGSDNIKEMTSCATRL RVTVNDETKVAPDAEFKANKAVNVVHHGKALQVIVGLDVPQVLEKIQGLLDDQDAVKTSTVTQPVDDSPESQTAALLSDS LGTGANVQSAIAQKNTVVAKVNDPSLVDPASVFKSLGIGVKDVQIDGTTVTITFSEMSDIANRIMA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787908, Length=546, Percent_Identity=31.6849816849817, Blast_Score=228, Evalue=7e-61, Organism=Escherichia coli, GI1787343, Length=530, Percent_Identity=29.2452830188679, Blast_Score=179, Evalue=5e-46, Organism=Escherichia coli, GI1786894, Length=385, Percent_Identity=31.9480519480519, Blast_Score=146, Evalue=4e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR010975 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 67926; Mature: 67926
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLQRFGAAMFTPVLLFTFAGIMTAICILMTNEQIFGSMAAPGTNWYGVWQTLQAGAFT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHCCHHH VFNIIPLLFVVGLPIGLAKQAPGRAAMEAVVIYASWNYMINAILTNWETAFGFKNFAKME HHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEEEEEHHHHHHHHHHCCHHHHCCCCCCEEE IVANSTNQGLTNIIGIKTLDTSIVGALIVAGIVVWLHNRYFDTKLPDWLGTFQGSSYIVI EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHH LGLFIMIPLAVLTCFFWPKVQMGISALQGFMKASGVFGIWVYAFLERVLIPTGLHHFIYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEE PFEYGPAAVSGGLKAWWFANLNTLGQSTRPIKELAPLMGFEGYGFEKVFGMLGIGLGLYA EECCCCHHHCCCCCEEEEECHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHEE TAKPSKKKETAALLIPAVLTGMFAGITEPVEFTFLFAAPVLWFVHAFLAATMDAIMFAVG CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGEFSGGLIGWASENWIPLWNHQWKTYLLQIAIGLVFVVIYYVAFKYLILKFNFVTPGR HHHHCCCCEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC EPEDQSAKLMTKKEYKAAKAAEKGASPAATDPYTQRAIAYLSALGGSDNIKEMTSCATRL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHE RVTVNDETKVAPDAEFKANKAVNVVHHGKALQVIVGLDVPQVLEKIQGLLDDQDAVKTST EEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHCC VTQPVDDSPESQTAALLSDSLGTGANVQSAIAQKNTVVAKVNDPSLVDPASVFKSLGIGV CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCC KDVQIDGTTVTITFSEMSDIANRIMA EEEEECCEEEEEEHHHHHHHHHHHCC >Mature Secondary Structure MQKLQRFGAAMFTPVLLFTFAGIMTAICILMTNEQIFGSMAAPGTNWYGVWQTLQAGAFT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHCCHHH VFNIIPLLFVVGLPIGLAKQAPGRAAMEAVVIYASWNYMINAILTNWETAFGFKNFAKME HHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEEEEEHHHHHHHHHHCCHHHHCCCCCCEEE IVANSTNQGLTNIIGIKTLDTSIVGALIVAGIVVWLHNRYFDTKLPDWLGTFQGSSYIVI EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHH LGLFIMIPLAVLTCFFWPKVQMGISALQGFMKASGVFGIWVYAFLERVLIPTGLHHFIYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEE PFEYGPAAVSGGLKAWWFANLNTLGQSTRPIKELAPLMGFEGYGFEKVFGMLGIGLGLYA EECCCCHHHCCCCCEEEEECHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHEE TAKPSKKKETAALLIPAVLTGMFAGITEPVEFTFLFAAPVLWFVHAFLAATMDAIMFAVG CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGEFSGGLIGWASENWIPLWNHQWKTYLLQIAIGLVFVVIYYVAFKYLILKFNFVTPGR HHHHCCCCEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC EPEDQSAKLMTKKEYKAAKAAEKGASPAATDPYTQRAIAYLSALGGSDNIKEMTSCATRL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHE RVTVNDETKVAPDAEFKANKAVNVVHHGKALQVIVGLDVPQVLEKIQGLLDDQDAVKTST EEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHCC VTQPVDDSPESQTAALLSDSLGTGANVQSAIAQKNTVVAKVNDPSLVDPASVFKSLGIGV CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCC KDVQIDGTTVTITFSEMSDIANRIMA EEEEECCEEEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8704981; 9384377; 11489864 [H]