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The map label for this gene is glvR [H]

Identifier: 116493938

GI number: 116493938

Start: 373209

End: 374021

Strand: Direct

Name: glvR [H]

Synonym: LSEI_0371

Alternate gene names: 116493938

Gene position: 373209-374021 (Clockwise)

Preceding gene: 116493937

Following gene: 116493939

Centisome position: 12.89

GC content: 39.36

Gene sequence:

>813_bases
GTGAAACTAGAATCCCTGATTAATCAGAAATATAGCAATTTAAATCAAACTGAAAAGGAAATTTTGGCTTTCATCATTGA
GAACCGTGATTTTGTTCGAAAGGCTAGTCTTAGTGAAGTAGCCGAAAAATCTTTATTTTCAAAGTCGGCAATCTTCCGTT
GTTGTAAGAAGATTGGATTGACAGGATTTAGCCAACTCCGATATGTTCTTACCGACGAAAAGGACAGTGAGCAGGATTCT
CTGATCAGTGTTGATTATCTGGCACAAACAGTTAAGTCCATGCTATGGACGGTGAACCAGTTCAAGAGTACGAATGCTGA
TGATATATATGCAACGCTTGCTGCTGCTGGTACCATTTACATTTATTCAACCGGCTGGCAGCAGCAGATTATGGCGCAAC
AATTGCAGAGAGATTTGTACTTGATTGGTAAATTCGCTTTTGTCTTTCCAACAGGGCATGACGAAATGCAATTGTCGAGT
ACTAAAATCAAACCTGGGGATGCCGTTATCGTCATTTCATATAAGGGGATGAATGCAACAATTGTCCAACTCGTTAATAA
TTTGAAACTCAATGGAGTTCGCATTGTGTCGTTTACATCGTTTCGACAAAACCGACTTGCGCAAGCGGCCAACTTTAATC
TTTATTACGACATCATCAATAAGACAGTTGGTATTGAAAGGAAAACGGAACGCTTTTTTGCCAATTTGACGCTACTAATT
GATATCTTCAGCATGGGGTTTGCCAATTACTTGGTAGCAAAAGAAGAGAGGGATCATGAACATGGTGAATACGGTCAAAG
AAAGAGTAAGTAA

Upstream 100 bases:

>100_bases
GATCACATTCTCAGAAATGTCAGACATTGCCAACCGCATCATGGCGTAAACGCTTGCATGATATAATCAGGTAAATCAGT
TCATGAGAGAAGGCAGCATT

Downstream 100 bases:

>100_bases
TTATTTCCAATCGTTTGCAGAGATGCTGCATTTGAATCTTAAAAGAATCTTCTACGGCATCATCCTAATCTTGTCACTTG
TACCAATGGCATATGCTCTC

Product: transcriptional regulator

Products: NA

Alternate protein names: Glv operon regulatory protein [H]

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKLESLINQKYSNLNQTEKEILAFIIENRDFVRKASLSEVAEKSLFSKSAIFRCCKKIGLTGFSQLRYVLTDEKDSEQDS
LISVDYLAQTVKSMLWTVNQFKSTNADDIYATLAAAGTIYIYSTGWQQQIMAQQLQRDLYLIGKFAFVFPTGHDEMQLSS
TKIKPGDAVIVISYKGMNATIVQLVNNLKLNGVRIVSFTSFRQNRLAQAANFNLYYDIINKTVGIERKTERFFANLTLLI
DIFSMGFANYLVAKEERDHEHGEYGQRKSK

Sequences:

>Translated_270_residues
MKLESLINQKYSNLNQTEKEILAFIIENRDFVRKASLSEVAEKSLFSKSAIFRCCKKIGLTGFSQLRYVLTDEKDSEQDS
LISVDYLAQTVKSMLWTVNQFKSTNADDIYATLAAAGTIYIYSTGWQQQIMAQQLQRDLYLIGKFAFVFPTGHDEMQLSS
TKIKPGDAVIVISYKGMNATIVQLVNNLKLNGVRIVSFTSFRQNRLAQAANFNLYYDIINKTVGIERKTERFFANLTLLI
DIFSMGFANYLVAKEERDHEHGEYGQRKSK
>Mature_270_residues
MKLESLINQKYSNLNQTEKEILAFIIENRDFVRKASLSEVAEKSLFSKSAIFRCCKKIGLTGFSQLRYVLTDEKDSEQDS
LISVDYLAQTVKSMLWTVNQFKSTNADDIYATLAAAGTIYIYSTGWQQQIMAQQLQRDLYLIGKFAFVFPTGHDEMQLSS
TKIKPGDAVIVISYKGMNATIVQLVNNLKLNGVRIVSFTSFRQNRLAQAANFNLYYDIINKTVGIERKTERFFANLTLLI
DIFSMGFANYLVAKEERDHEHGEYGQRKSK

Specific function: Positive regulator of the glv operon expression, which consists of glvA, glvR and glvC [H]

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 30834; Mature: 30834

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS51071 HTH_RPIR ; PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLESLINQKYSNLNQTEKEILAFIIENRDFVRKASLSEVAEKSLFSKSAIFRCCKKIGL
CCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TGFSQLRYVLTDEKDSEQDSLISVDYLAQTVKSMLWTVNQFKSTNADDIYATLAAAGTIY
CCHHHHEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEE
IYSTGWQQQIMAQQLQRDLYLIGKFAFVFPTGHDEMQLSSTKIKPGDAVIVISYKGMNAT
EEECCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEECCCCCCCCCEEEEEEECCCCHH
IVQLVNNLKLNGVRIVSFTSFRQNRLAQAANFNLYYDIINKTVGIERKTERFFANLTLLI
HHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCEEEEEEHHHHCCCCHHHHHHHHHHHHHH
DIFSMGFANYLVAKEERDHEHGEYGQRKSK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLESLINQKYSNLNQTEKEILAFIIENRDFVRKASLSEVAEKSLFSKSAIFRCCKKIGL
CCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TGFSQLRYVLTDEKDSEQDSLISVDYLAQTVKSMLWTVNQFKSTNADDIYATLAAAGTIY
CCHHHHEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEE
IYSTGWQQQIMAQQLQRDLYLIGKFAFVFPTGHDEMQLSSTKIKPGDAVIVISYKGMNAT
EEECCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEECCCCCCCCCEEEEEEECCCCHH
IVQLVNNLKLNGVRIVSFTSFRQNRLAQAANFNLYYDIINKTVGIERKTERFFANLTLLI
HHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCEEEEEEHHHHCCCCHHHHHHHHHHHHHH
DIFSMGFANYLVAKEERDHEHGEYGQRKSK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8704981; 9384377; 11489864 [H]