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The map label for this gene is 116493907

Identifier: 116493907

GI number: 116493907

Start: 340803

End: 341270

Strand: Direct

Name: 116493907

Synonym: LSEI_0339

Alternate gene names: NA

Gene position: 340803-341270 (Clockwise)

Preceding gene: 116493906

Following gene: 116493911

Centisome position: 11.77

GC content: 42.74

Gene sequence:

>468_bases
GTGATTGTTGATGCTCAAAGTGTTAAAACCACTGATTTAACGAAAAATAGTGGCTACGATGGCGGCAAAAAGATTTCAGG
GATTAAGCGTCATATGGCGGTTGATATTAATGGTTTACCACAAGCCATTCTCGTGACACGAGCTAATGTATCAGATCGTT
CAGGTGTATTGGCTATGTTTAGTTTGGCTAGCCAAAATTTAGAGCTGGTTCAGCATGTCATGGTTGATGGTGGCTACACT
GGCAATGACTTTGCGGATCAGGTGAAGCTCATTTTGAATGCTAAGACGACGGTAGCTAAACGCAACGAGTTGCATATGTT
CACGGTGTTACCGCAACGATGGATCGTTGAACGTTCATGGAGTTGGCTAGACAAATGTCGGCGACTTTGGAAAAACTGTG
AACGTGCCCTTAACAGCAGTCTTCAAATGGTTGTATTGGACTTCCTGAAGATAGTTCTTAAAAGATAG

Upstream 100 bases:

>100_bases
ATAAACCAGACCCGACAGCTGATTCGCTATTAGAAAGGCTTTTAAAAAAACTGTTGCTTCCTATCGCTTTGCACAGGGCC
GATCGGCCCGAACGTCGTTT

Downstream 100 bases:

>100_bases
TTCTTAAAAGATAGTTCTTAAAAGATACTAGACAGGTTCTAAGAGATTTTAGACAGCTTCTAACACTTTTAGTATAGAAG
GGTAATGTTTTTGCTTGGTA

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; IS5 Family Transposase; Transposase IS5 Family Protein; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase Of; Isxo3 Transposase Protein; Transposase Fragment; ISXo3 Transposase ORF B; Transposase And Inactivated Derivatives; IS4 Insertion Sequence Transposase Protein; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; Transposase-Like Protein; Transposase Is4 Family; IS Transposase; Transposase IS5 Family; Transposase Protein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGVLAMFSLASQNLELVQHVMVDGGYT
GNDFADQVKLILNAKTTVAKRNELHMFTVLPQRWIVERSWSWLDKCRRLWKNCERALNSSLQMVVLDFLKIVLKR

Sequences:

>Translated_155_residues
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGVLAMFSLASQNLELVQHVMVDGGYT
GNDFADQVKLILNAKTTVAKRNELHMFTVLPQRWIVERSWSWLDKCRRLWKNCERALNSSLQMVVLDFLKIVLKR
>Mature_155_residues
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGVLAMFSLASQNLELVQHVMVDGGYT
GNDFADQVKLILNAKTTVAKRNELHMFTVLPQRWIVERSWSWLDKCRRLWKNCERALNSSLQMVVLDFLKIVLKR

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17488; Mature: 17488

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGVLAMF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEEECCCCCCCCHHHHH
SLASQNLELVQHVMVDGGYTGNDFADQVKLILNAKTTVAKRNELHMFTVLPQRWIVERSW
HHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHCCCCEEEEEECCHHHHHHCCH
SWLDKCRRLWKNCERALNSSLQMVVLDFLKIVLKR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGVLAMF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEEECCCCCCCCHHHHH
SLASQNLELVQHVMVDGGYTGNDFADQVKLILNAKTTVAKRNELHMFTVLPQRWIVERSW
HHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHCCCCEEEEEECCHHHHHHCCH
SWLDKCRRLWKNCERALNSSLQMVVLDFLKIVLKR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA