| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is yiaC [H]
Identifier: 116493906
GI number: 116493906
Start: 340123
End: 340446
Strand: Direct
Name: yiaC [H]
Synonym: LSEI_0338
Alternate gene names: 116493906
Gene position: 340123-340446 (Clockwise)
Preceding gene: 116493903
Following gene: 116493907
Centisome position: 11.75
GC content: 44.14
Gene sequence:
>324_bases ATGCGGTTATGGTGGCAGGGAAATTTACAGGCCCACCAGTTTATTCACGCTGAATATTGGAAAAGTAATGCTCCTCTGGT GCGCCCTTTAATTCAGCAATCAACATTGTGGGTTGTGCGCGAAGGAGCAACAGTGATTGCTTTTTGTGGCTTGCAACAAG ACTTCATCGCCGGCCTTTTTGTTGATGAAAAACACCGTGGACGTGGCGTTGGTACAGCTTTGATGGCTAAGTTACAAGCG ACATATTCCAAATTGAGATTGACGGTTTACCAGAAGAATATTCGAGTTGCGCAATTTTATAAGAACCTGTCTAGTATCTG CTGA
Upstream 100 bases:
>100_bases TAGAAAGAACAAGAGTTTGATATTAGAAAAGAGGGACGGTATGGCACCATACACGATTGAATAAATAAGCGCGCCCAGTC GCGAACAATTGGATCAAATT
Downstream 100 bases:
>100_bases ATCTGGTAGAATTGTGGAAAACCGACTGAGGAGTTTGTCATGCCAGATTATCCAAGCAATATTTCTCGAGCGCAATTTGC GTTAATACAACCTGATTTAG
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MRLWWQGNLQAHQFIHAEYWKSNAPLVRPLIQQSTLWVVREGATVIAFCGLQQDFIAGLFVDEKHRGRGVGTALMAKLQA TYSKLRLTVYQKNIRVAQFYKNLSSIC
Sequences:
>Translated_107_residues MRLWWQGNLQAHQFIHAEYWKSNAPLVRPLIQQSTLWVVREGATVIAFCGLQQDFIAGLFVDEKHRGRGVGTALMAKLQA TYSKLRLTVYQKNIRVAQFYKNLSSIC >Mature_107_residues MRLWWQGNLQAHQFIHAEYWKSNAPLVRPLIQQSTLWVVREGATVIAFCGLQQDFIAGLFVDEKHRGRGVGTALMAKLQA TYSKLRLTVYQKNIRVAQFYKNLSSIC
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1789972, Length=103, Percent_Identity=35.9223300970874, Blast_Score=66, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 12325; Mature: 12325
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLWWQGNLQAHQFIHAEYWKSNAPLVRPLIQQSTLWVVREGATVIAFCGLQQDFIAGLF CCEEECCCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCEEEEEECCCHHHHHHEE VDEKHRGRGVGTALMAKLQATYSKLRLTVYQKNIRVAQFYKNLSSIC ECCCCCCCCHHHHHHHHHHHHHHHHHEEEHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MRLWWQGNLQAHQFIHAEYWKSNAPLVRPLIQQSTLWVVREGATVIAFCGLQQDFIAGLF CCEEECCCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCEEEEEECCCHHHHHHEE VDEKHRGRGVGTALMAKLQATYSKLRLTVYQKNIRVAQFYKNLSSIC ECCCCCCCCHHHHHHHHHHHHHHHHHEEEHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2180922; 8041620; 9278503 [H]