| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116493903
Identifier: 116493903
GI number: 116493903
Start: 335929
End: 336153
Strand: Direct
Name: 116493903
Synonym: LSEI_0335
Alternate gene names: NA
Gene position: 335929-336153 (Clockwise)
Preceding gene: 116493902
Following gene: 116493906
Centisome position: 11.6
GC content: 44.89
Gene sequence:
>225_bases ATGAGTAAAATCATGACCTCCTTTCTGGTATTCATCGATACGATCGGTGTCGCCATCGCTTTGTTAGGTGGCAATATGAT GTTGTGTCTCCTGATGGGCATTATGACCATTATTTTGTATGTTAAAGTGAATCCAATCTTATTTGGCGACTATGACCGTC GACGTGAAGAACGCATTGAGCAGCGGCGGAAAGCCTTGACGGCACGACGGGAGAACGACAAATAA
Upstream 100 bases:
>100_bases GCTAAAAAGCAGGATGAATCAGCGGATGATATTGATTTGAATGATCTGAGCGGATTAGACTTTAGTCAAACCAGTCATGA AAAGAAGAAGGATGATCCGG
Downstream 100 bases:
>100_bases GAACCGTAAATAAATAGGCGCCTTGATCGCGGGATGTTAAGGTCTCGCAATCAAGGCGCCTATTCGTGATAAGAGGTCGA CAACGTTAACTTATTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSKIMTSFLVFIDTIGVAIALLGGNMMLCLLMGIMTIILYVKVNPILFGDYDRRREERIEQRRKALTARRENDK
Sequences:
>Translated_74_residues MSKIMTSFLVFIDTIGVAIALLGGNMMLCLLMGIMTIILYVKVNPILFGDYDRRREERIEQRRKALTARRENDK >Mature_73_residues SKIMTSFLVFIDTIGVAIALLGGNMMLCLLMGIMTIILYVKVNPILFGDYDRRREERIEQRRKALTARRENDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8565; Mature: 8433
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 8.1 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIMTSFLVFIDTIGVAIALLGGNMMLCLLMGIMTIILYVKVNPILFGDYDRRREERIE CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHH QRRKALTARRENDK HHHHHHHHHCCCCC >Mature Secondary Structure SKIMTSFLVFIDTIGVAIALLGGNMMLCLLMGIMTIILYVKVNPILFGDYDRRREERIE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHH QRRKALTARRENDK HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA