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The map label for this gene is 116493902

Identifier: 116493902

GI number: 116493902

Start: 335328

End: 335798

Strand: Direct

Name: 116493902

Synonym: LSEI_0334

Alternate gene names: NA

Gene position: 335328-335798 (Clockwise)

Preceding gene: 116493901

Following gene: 116493903

Centisome position: 11.58

GC content: 43.1

Gene sequence:

>471_bases
GTGATTGTTGATGCTCAAAGTGTTAAAACCACTGATTTAACGAAAAATAGTGGCTACGATGGCGGCAAAAAGATTTCAGG
GATTAAGCGTCATATGGCGGTTGATATTAATGGTTTACCACAAGCCATTCTCGTGACACGAGCTAATGTATCAGATCGTT
CAGGTGCATTGGCTATGTTTAGTTTGGCTAGCCAAAATTTAGAGCTGGTTCAGCATGTCATGGTTGATGGTGGCTATACT
GGCAATGACTTTGCGGATCAGGTGAAGCTCATTTTGAATGCTAAGACGACGGTAGCTAAACGCAACGAGTTGCATACGTT
CACGGTGTTACCGCAACGATGGATCATTGAACGTTCATGGAGTTGGCTAGACAAATGTCGGCGACTTTGGAAAAACTGTG
AACGCGCCCTTAACAGCAGTCTTCAAATGGTTGTATTGGCCTTCCTGAAGATAGTTCTTAAAAGATACTAG

Upstream 100 bases:

>100_bases
ATAAACCAGACCCGACAGCTGATTCGCTATTAGAAAGGCTTTTAAAAAAACTGTTGCTTCCTATCGCTTTGCACAGGGCC
GATCGGCCCGAACGTCGTTT

Downstream 100 bases:

>100_bases
ACAGGTTCTAATGAAGCCAAAAAGACACCGGCTAAAAAGCAGGATGAATCAGCGGATGATATTGATTTGAATGATCTGAG
CGGATTAGACTTTAGTCAAA

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; IS5 Family Transposase; Transposase IS5 Family Protein; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase Of; Isxo3 Transposase Protein; Transposase Fragment; ISXo3 Transposase ORF B; Transposase And Inactivated Derivatives; IS4 Insertion Sequence Transposase Protein; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; IS4 Family Insertion Sequence Transposase Protein; Transposase-Like Protein; Transposase Is4 Family; IS Transposase; Transposase IS5 Family; Transposase Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGALAMFSLASQNLELVQHVMVDGGYT
GNDFADQVKLILNAKTTVAKRNELHTFTVLPQRWIIERSWSWLDKCRRLWKNCERALNSSLQMVVLAFLKIVLKRY

Sequences:

>Translated_156_residues
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGALAMFSLASQNLELVQHVMVDGGYT
GNDFADQVKLILNAKTTVAKRNELHTFTVLPQRWIIERSWSWLDKCRRLWKNCERALNSSLQMVVLAFLKIVLKRY
>Mature_156_residues
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGALAMFSLASQNLELVQHVMVDGGYT
GNDFADQVKLILNAKTTVAKRNELHTFTVLPQRWIIERSWSWLDKCRRLWKNCERALNSSLQMVVLAFLKIVLKRY

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17563; Mature: 17563

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGALAMF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEEECCCCCCCCHHHHH
SLASQNLELVQHVMVDGGYTGNDFADQVKLILNAKTTVAKRNELHTFTVLPQRWIIERSW
HHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHCCCCEEEEECCHHHHHHCCH
SWLDKCRRLWKNCERALNSSLQMVVLAFLKIVLKRY
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGALAMF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEEECCCCCCCCHHHHH
SLASQNLELVQHVMVDGGYTGNDFADQVKLILNAKTTVAKRNELHTFTVLPQRWIIERSW
HHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHCCCCEEEEECCHHHHHHCCH
SWLDKCRRLWKNCERALNSSLQMVVLAFLKIVLKRY
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA