Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493903

Identifier: 116493903

GI number: 116493903

Start: 335929

End: 336153

Strand: Direct

Name: 116493903

Synonym: LSEI_0335

Alternate gene names: NA

Gene position: 335929-336153 (Clockwise)

Preceding gene: 116493902

Following gene: 116493906

Centisome position: 11.6

GC content: 44.89

Gene sequence:

>225_bases
ATGAGTAAAATCATGACCTCCTTTCTGGTATTCATCGATACGATCGGTGTCGCCATCGCTTTGTTAGGTGGCAATATGAT
GTTGTGTCTCCTGATGGGCATTATGACCATTATTTTGTATGTTAAAGTGAATCCAATCTTATTTGGCGACTATGACCGTC
GACGTGAAGAACGCATTGAGCAGCGGCGGAAAGCCTTGACGGCACGACGGGAGAACGACAAATAA

Upstream 100 bases:

>100_bases
GCTAAAAAGCAGGATGAATCAGCGGATGATATTGATTTGAATGATCTGAGCGGATTAGACTTTAGTCAAACCAGTCATGA
AAAGAAGAAGGATGATCCGG

Downstream 100 bases:

>100_bases
GAACCGTAAATAAATAGGCGCCTTGATCGCGGGATGTTAAGGTCTCGCAATCAAGGCGCCTATTCGTGATAAGAGGTCGA
CAACGTTAACTTATTTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MSKIMTSFLVFIDTIGVAIALLGGNMMLCLLMGIMTIILYVKVNPILFGDYDRRREERIEQRRKALTARRENDK

Sequences:

>Translated_74_residues
MSKIMTSFLVFIDTIGVAIALLGGNMMLCLLMGIMTIILYVKVNPILFGDYDRRREERIEQRRKALTARRENDK
>Mature_73_residues
SKIMTSFLVFIDTIGVAIALLGGNMMLCLLMGIMTIILYVKVNPILFGDYDRRREERIEQRRKALTARRENDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8565; Mature: 8433

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
8.1 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIMTSFLVFIDTIGVAIALLGGNMMLCLLMGIMTIILYVKVNPILFGDYDRRREERIE
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHH
QRRKALTARRENDK
HHHHHHHHHCCCCC
>Mature Secondary Structure 
SKIMTSFLVFIDTIGVAIALLGGNMMLCLLMGIMTIILYVKVNPILFGDYDRRREERIE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHH
QRRKALTARRENDK
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA