Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493811

Identifier: 116493811

GI number: 116493811

Start: 240381

End: 241433

Strand: Direct

Name: 116493811

Synonym: LSEI_0240

Alternate gene names: NA

Gene position: 240381-241433 (Clockwise)

Preceding gene: 116493810

Following gene: 116493812

Centisome position: 8.3

GC content: 40.08

Gene sequence:

>1053_bases
ATGGACATTCAGGACCAGCTTAAGCAATTCAAGGGCAAACGAGTACTTTTGCTTGCTCCGCAGTTTTTTCACTATATTGA
CGAAATTCGTGATGCCATGAAAGCTGCAGAAATTGATTGTGATTTCCTTGATGAGCGCCCACTGCCGGGTTTTACAGGAA
AAGCAATCGCACGTTATTTGCCAATGATTAATGAGCGGCAGGTTGCCAAGAATGTTGATGATCAATTGACAGCCAAGAGT
TATGATTATCTCTTAGTGATTAAAGGCGAATCCTTGAGCACCAAACTCCTGGCAGACTTTAAACAGGAAAACCCAAATGC
AAAACTAGTGCTATTTTTGTGGGATTCGGTGGCAAATTCCAAGCATGCGGAAGCGTTTTTTGACCAGTTCGATATGGTTT
ACACATTTGACGCAAACGATGCCGCAACTTATAAAATTGAATTTTTGCCACTTTTTGTAGGGTCACAGTTTGATCCTCGT
CTGATTGATCAAGATCAGCAGCAGGATATTGATCTTGCTTTTATTGGTACCGTGCATTCCAATCGGAGTGAGTTATTGAA
TTTAGTTGAAAAGCTTGCAGCTAGTGCACATTTATCTTTTTATGATTTCCGATATGTTCAAAGCAAGCTTGTATATGCTG
TCAGATATTTACAAGATCGTGCTTTCAGAAAATCGCCAGCCGGTACCGTCCATTTTAATAAGATTTCTGCTGAAGCAATG
CTGAAAACTTTACGGCGAACCAGAACAATTGTTGATGTCACCCATCCAAAGCAAACCGGACTAACAGGACGCGTGATTGA
AGGCTTATCAATGGGTCGAAAAGTACTCACAACAAATAGTAAGGTCTTAGATTACGACTTTATCAACAAGGAAAATGTTC
AAATATTTGACGAGAAGCTCACAAATTTAGATGAAGATTTTATCATGAAACCATATGTGGGGGATCCATTAATGGTTTAT
AAAAACTTTTCAGTCTATAAATGGCTGGAGACGGTACTGACCGGGACTGCTTATGTACCGGTTGACCATCGATCGGTTGT
TGAAAAGGATTAG

Upstream 100 bases:

>100_bases
GAAATGCGTGAGCTGTAGTTAAGAGTGATGCTTACGTAATGTGCTTGATGTTCGTTGGATTTTGACTAGCAATATTTATT
GAATGACGAAAGGAACAGAT

Downstream 100 bases:

>100_bases
TCGCTTAGAAATGGAGATCGTTTACACATGTACGAACCAACTAAAAAACGCCGCGTTGCCGAAGACGTGGCCAAGGTTTT
CCCTAAAGAAGTCACCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MDIQDQLKQFKGKRVLLLAPQFFHYIDEIRDAMKAAEIDCDFLDERPLPGFTGKAIARYLPMINERQVAKNVDDQLTAKS
YDYLLVIKGESLSTKLLADFKQENPNAKLVLFLWDSVANSKHAEAFFDQFDMVYTFDANDAATYKIEFLPLFVGSQFDPR
LIDQDQQQDIDLAFIGTVHSNRSELLNLVEKLAASAHLSFYDFRYVQSKLVYAVRYLQDRAFRKSPAGTVHFNKISAEAM
LKTLRRTRTIVDVTHPKQTGLTGRVIEGLSMGRKVLTTNSKVLDYDFINKENVQIFDEKLTNLDEDFIMKPYVGDPLMVY
KNFSVYKWLETVLTGTAYVPVDHRSVVEKD

Sequences:

>Translated_350_residues
MDIQDQLKQFKGKRVLLLAPQFFHYIDEIRDAMKAAEIDCDFLDERPLPGFTGKAIARYLPMINERQVAKNVDDQLTAKS
YDYLLVIKGESLSTKLLADFKQENPNAKLVLFLWDSVANSKHAEAFFDQFDMVYTFDANDAATYKIEFLPLFVGSQFDPR
LIDQDQQQDIDLAFIGTVHSNRSELLNLVEKLAASAHLSFYDFRYVQSKLVYAVRYLQDRAFRKSPAGTVHFNKISAEAM
LKTLRRTRTIVDVTHPKQTGLTGRVIEGLSMGRKVLTTNSKVLDYDFINKENVQIFDEKLTNLDEDFIMKPYVGDPLMVY
KNFSVYKWLETVLTGTAYVPVDHRSVVEKD
>Mature_350_residues
MDIQDQLKQFKGKRVLLLAPQFFHYIDEIRDAMKAAEIDCDFLDERPLPGFTGKAIARYLPMINERQVAKNVDDQLTAKS
YDYLLVIKGESLSTKLLADFKQENPNAKLVLFLWDSVANSKHAEAFFDQFDMVYTFDANDAATYKIEFLPLFVGSQFDPR
LIDQDQQQDIDLAFIGTVHSNRSELLNLVEKLAASAHLSFYDFRYVQSKLVYAVRYLQDRAFRKSPAGTVHFNKISAEAM
LKTLRRTRTIVDVTHPKQTGLTGRVIEGLSMGRKVLTTNSKVLDYDFINKENVQIFDEKLTNLDEDFIMKPYVGDPLMVY
KNFSVYKWLETVLTGTAYVPVDHRSVVEKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40262; Mature: 40262

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQDQLKQFKGKRVLLLAPQFFHYIDEIRDAMKAAEIDCDFLDERPLPGFTGKAIARYL
CCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
PMINERQVAKNVDDQLTAKSYDYLLVIKGESLSTKLLADFKQENPNAKLVLFLWDSVANS
CCCCHHHHHHCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCC
KHAEAFFDQFDMVYTFDANDAATYKIEFLPLFVGSQFDPRLIDQDQQQDIDLAFIGTVHS
HHHHHHHHCCCEEEEECCCCCEEEEEEEEEEEECCCCCCHHCCCCCCCCCCEEEEEECCC
NRSELLNLVEKLAASAHLSFYDFRYVQSKLVYAVRYLQDRAFRKSPAGTVHFNKISAEAM
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH
LKTLRRTRTIVDVTHPKQTGLTGRVIEGLSMGRKVLTTNSKVLDYDFINKENVQIFDEKL
HHHHHHHHCEEEECCCCCCCCCHHHHHHHHCCCEEEECCCEEEEEECCCCCCCHHHHHHH
TNLDEDFIMKPYVGDPLMVYKNFSVYKWLETVLTGTAYVPVDHRSVVEKD
CCCCHHHEECCCCCCCEEEEECCHHHHHHHHHHCCCEEECCCCHHHCCCC
>Mature Secondary Structure
MDIQDQLKQFKGKRVLLLAPQFFHYIDEIRDAMKAAEIDCDFLDERPLPGFTGKAIARYL
CCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
PMINERQVAKNVDDQLTAKSYDYLLVIKGESLSTKLLADFKQENPNAKLVLFLWDSVANS
CCCCHHHHHHCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCC
KHAEAFFDQFDMVYTFDANDAATYKIEFLPLFVGSQFDPRLIDQDQQQDIDLAFIGTVHS
HHHHHHHHCCCEEEEECCCCCEEEEEEEEEEEECCCCCCHHCCCCCCCCCCEEEEEECCC
NRSELLNLVEKLAASAHLSFYDFRYVQSKLVYAVRYLQDRAFRKSPAGTVHFNKISAEAM
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH
LKTLRRTRTIVDVTHPKQTGLTGRVIEGLSMGRKVLTTNSKVLDYDFINKENVQIFDEKL
HHHHHHHHCEEEECCCCCCCCCHHHHHHHHCCCEEEECCCEEEEEECCCCCCCHHHHHHH
TNLDEDFIMKPYVGDPLMVYKNFSVYKWLETVLTGTAYVPVDHRSVVEKD
CCCCHHHEECCCCCCCEEEEECCHHHHHHHHHHCCCEEECCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA