Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493812

Identifier: 116493812

GI number: 116493812

Start: 241461

End: 241805

Strand: Direct

Name: 116493812

Synonym: LSEI_0241

Alternate gene names: NA

Gene position: 241461-241805 (Clockwise)

Preceding gene: 116493811

Following gene: 116493813

Centisome position: 8.34

GC content: 43.48

Gene sequence:

>345_bases
ATGTACGAACCAACTAAAAAACGCCGCGTTGCCGAAGACGTGGCCAAGGTTTTCCCTAAAGAAGTCACCAATCAGATTTT
TGATGTGATCGCTGTGATGAATAAGGCTAAGCAAATTGTGACAGCACCGGTCGCCATTGCATTTTCGGATGATTATACCG
ATGATGAAATGTATGCCATGATCATTCAAGGCAATCTTGCACCAGCACAAGAGTTTCCGCTTACCTATGCTGGCGAAAAG
CCATTTTTGGGTCATGGGTATATCCTTGTGGTCAAAGATAAGCCGAAAACAATTCGGCTGGATTTCAGTACGGCTAATCC
GTTTAAGGCAGAAGAATCCAAATAA

Upstream 100 bases:

>100_bases
ATGGCTGGAGACGGTACTGACCGGGACTGCTTATGTACCGGTTGACCATCGATCGGTTGTTGAAAAGGATTAGTCGCTTA
GAAATGGAGATCGTTTACAC

Downstream 100 bases:

>100_bases
AACTGGCCTTTTCATGAAAAGTTCGATACAATAGTAAACCGTAATCGTTACCGTTTACTATTGGGAGGCAGCTATGAGCG
AACCGATTTTGACCGTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MYEPTKKRRVAEDVAKVFPKEVTNQIFDVIAVMNKAKQIVTAPVAIAFSDDYTDDEMYAMIIQGNLAPAQEFPLTYAGEK
PFLGHGYILVVKDKPKTIRLDFSTANPFKAEESK

Sequences:

>Translated_114_residues
MYEPTKKRRVAEDVAKVFPKEVTNQIFDVIAVMNKAKQIVTAPVAIAFSDDYTDDEMYAMIIQGNLAPAQEFPLTYAGEK
PFLGHGYILVVKDKPKTIRLDFSTANPFKAEESK
>Mature_114_residues
MYEPTKKRRVAEDVAKVFPKEVTNQIFDVIAVMNKAKQIVTAPVAIAFSDDYTDDEMYAMIIQGNLAPAQEFPLTYAGEK
PFLGHGYILVVKDKPKTIRLDFSTANPFKAEESK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12816; Mature: 12816

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEPTKKRRVAEDVAKVFPKEVTNQIFDVIAVMNKAKQIVTAPVAIAFSDDYTDDEMYAM
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCCCEEEE
IIQGNLAPAQEFPLTYAGEKPFLGHGYILVVKDKPKTIRLDFSTANPFKAEESK
EEECCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MYEPTKKRRVAEDVAKVFPKEVTNQIFDVIAVMNKAKQIVTAPVAIAFSDDYTDDEMYAM
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCCCEEEE
IIQGNLAPAQEFPLTYAGEKPFLGHGYILVVKDKPKTIRLDFSTANPFKAEESK
EEECCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA