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The map label for this gene is yibD [C]

Identifier: 116493805

GI number: 116493805

Start: 231503

End: 232387

Strand: Direct

Name: yibD [C]

Synonym: LSEI_0234

Alternate gene names: 116493805

Gene position: 231503-232387 (Clockwise)

Preceding gene: 116493804

Following gene: 116493806

Centisome position: 8.0

GC content: 44.97

Gene sequence:

>885_bases
ATGGTCAAAGTTTCAATCATTATTCCTGCTTACAATGCTGCTGCCACTCTAAATCGCGCTGTTCAGTCTGTCCTTAAACA
AACCTTGAACGATTTTGAAATATTAATCGTCAATAATGGATCGACGGATCAGACAGCAGCAGTTATGTCACACCTTATCC
AAGCTGACCCTCGGATACACATTCTGCAAAGTATGAAAGGGCGCAGCCGCGCTCGTAATCAAGGACTGACAAAGGCTCAA
GGTACTTTTATCCAGTTTCTGGACGCGGATGACGAACTTGCTGTCAATAAGCTGGAAGTGGGCAGCAGTTATTTGACGAA
TCATCCAAACAGTAGCGCATACATCACGGCGGCTAAATATCAAAATGATAAGCGTGGCGATGAGAGCATTCGCCAGATTC
CGCTAACATCCGCAGCACCTTTATTAAGGGCAAATTATTTGCCAATGAGTGCACCGCTTGTGAGGAAAAGTGTGCTCATA
AAGCCCTTTAGAGAAGATCTTGAATATAATGAGGACTGGTTATTTTGGGCTGAAAACCTGTACAAAAAAGAGATAGCTGT
TAGCTCGACAGTCGGCACAACGATCCATATTACGTCTGCTAATACTATGACTCAGTTTGATCGAATGCAAATGTACGAGT
GTTATGTGCGGGGAATTTTAAAAGAAGAATTTTCGGCACGCGGCCCTCGCTACTGGGCGCGGGATATGCGCTATGCACTC
AATTATCTACTTAGCGCGTCGGATGCAACGAGCGAGGACCTGAAGCTATCTAAGACAATGGCTTGGCCAATCCGGTTTAG
CCGTCTGTTATTAGCTGTGCCACCGTTGCGAGCGGTTATTACAAAAAAACGTAATGCCGTGAAAGCGCGTAGTCAATATG
GATAA

Upstream 100 bases:

>100_bases
CATCGCAAACTGCATGAAATGATGGCGTTTCGTTTCAATATGTTACGACTTTTTATTCGCGCTTAATGATTGATGGCTAG
TGCAAATCGGAGGATCACTT

Downstream 100 bases:

>100_bases
AATGCAAGAGCAGTTGAGGTACTGGGAACACTAATCGGTGGTGGAAAATTTGGAGGGAAAAACTTGATACCAAAAATTAT
TCATTATGTTTGGATTGGCG

Product: glycosyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MVKVSIIIPAYNAAATLNRAVQSVLKQTLNDFEILIVNNGSTDQTAAVMSHLIQADPRIHILQSMKGRSRARNQGLTKAQ
GTFIQFLDADDELAVNKLEVGSSYLTNHPNSSAYITAAKYQNDKRGDESIRQIPLTSAAPLLRANYLPMSAPLVRKSVLI
KPFREDLEYNEDWLFWAENLYKKEIAVSSTVGTTIHITSANTMTQFDRMQMYECYVRGILKEEFSARGPRYWARDMRYAL
NYLLSASDATSEDLKLSKTMAWPIRFSRLLLAVPPLRAVITKKRNAVKARSQYG

Sequences:

>Translated_294_residues
MVKVSIIIPAYNAAATLNRAVQSVLKQTLNDFEILIVNNGSTDQTAAVMSHLIQADPRIHILQSMKGRSRARNQGLTKAQ
GTFIQFLDADDELAVNKLEVGSSYLTNHPNSSAYITAAKYQNDKRGDESIRQIPLTSAAPLLRANYLPMSAPLVRKSVLI
KPFREDLEYNEDWLFWAENLYKKEIAVSSTVGTTIHITSANTMTQFDRMQMYECYVRGILKEEFSARGPRYWARDMRYAL
NYLLSASDATSEDLKLSKTMAWPIRFSRLLLAVPPLRAVITKKRNAVKARSQYG
>Mature_294_residues
MVKVSIIIPAYNAAATLNRAVQSVLKQTLNDFEILIVNNGSTDQTAAVMSHLIQADPRIHILQSMKGRSRARNQGLTKAQ
GTFIQFLDADDELAVNKLEVGSSYLTNHPNSSAYITAAKYQNDKRGDESIRQIPLTSAAPLLRANYLPMSAPLVRKSVLI
KPFREDLEYNEDWLFWAENLYKKEIAVSSTVGTTIHITSANTMTQFDRMQMYECYVRGILKEEFSARGPRYWARDMRYAL
NYLLSASDATSEDLKLSKTMAWPIRFSRLLLAVPPLRAVITKKRNAVKARSQYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=92, Percent_Identity=39.1304347826087, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 33186; Mature: 33186

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVSIIIPAYNAAATLNRAVQSVLKQTLNDFEILIVNNGSTDQTAAVMSHLIQADPRIH
CEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHH
ILQSMKGRSRARNQGLTKAQGTFIQFLDADDELAVNKLEVGSSYLTNHPNSSAYITAAKY
HHHHHHHHHHHHHCCCCHHCCCEEEEECCCCCHHHHHHHCCCHHHHCCCCCCEEEEEECC
QNDKRGDESIRQIPLTSAAPLLRANYLPMSAPLVRKSVLIKPFREDLEYNEDWLFWAENL
CCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YKKEIAVSSTVGTTIHITSANTMTQFDRMQMYECYVRGILKEEFSARGPRYWARDMRYAL
HHHHHHEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
NYLLSASDATSEDLKLSKTMAWPIRFSRLLLAVPPLRAVITKKRNAVKARSQYG
HHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKVSIIIPAYNAAATLNRAVQSVLKQTLNDFEILIVNNGSTDQTAAVMSHLIQADPRIH
CEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHH
ILQSMKGRSRARNQGLTKAQGTFIQFLDADDELAVNKLEVGSSYLTNHPNSSAYITAAKY
HHHHHHHHHHHHHCCCCHHCCCEEEEECCCCCHHHHHHHCCCHHHHCCCCCCEEEEEECC
QNDKRGDESIRQIPLTSAAPLLRANYLPMSAPLVRKSVLIKPFREDLEYNEDWLFWAENL
CCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YKKEIAVSSTVGTTIHITSANTMTQFDRMQMYECYVRGILKEEFSARGPRYWARDMRYAL
HHHHHHEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
NYLLSASDATSEDLKLSKTMAWPIRFSRLLLAVPPLRAVITKKRNAVKARSQYG
HHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]