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The map label for this gene is wcaA [C]

Identifier: 116493804

GI number: 116493804

Start: 230770

End: 231468

Strand: Direct

Name: wcaA [C]

Synonym: LSEI_0233

Alternate gene names: 116493804

Gene position: 230770-231468 (Clockwise)

Preceding gene: 116493803

Following gene: 116493805

Centisome position: 7.97

GC content: 43.63

Gene sequence:

>699_bases
ATGATGATTTCAGTTTGCATGGCAACATACAATGGAGCCCGGTTTGTTGGTGCCCAGCTCAAATCAATCCTTGATCAGCT
TGGGTCTAATGACGAGGTGATTGTGGTTGATGATCACTCGACTGATGAGACTGTCGCTGTCATCGATCAATTTAAAGATT
CACGCATTAAGTTGATCGAAAACACGACTAATCACGGCCCAATTTATGGCTTTATGACCGCGTTGAATTATGCTAAAGGT
GATTATCTTTTTCTATCTGACCAAGATGATGTTTGGTTTCCCAACAAGGTTACTCGCGTCATGACAGCTTTTGAGAAGGA
AAAGGCAGTCGTTGTTGTCCATGACGGTATCGTCACTGATCAGTCGCTTAGTCGGGTTGACGATTCTTGGAATCATTTCA
GTCATAGAGTACCGAGTCAGTCCATGATTAAAACACTAATCAAGAATGGATACACCGGTGCTATGATGGCCTTTAGTCGC
GAACTTTTGCCACTCGTTCTTCCTTTTCCCAAGCAGGTGCCAATGCACGACTGGTGGATTGCTTTGGTAGCCATGAAACA
CCACATGAAGATTGTCGTTTTGCCAGATAAATTGATGTATTACCGGCGTCATGCCGGTAATGTGACGGGTAGCCATCGCA
AACTGCATGAAATGATGGCGTTTCGTTTCAATATGTTACGACTTTTTATTCGCGCTTAA

Upstream 100 bases:

>100_bases
ACCATTTACGCGTCATGCTCAGGCTCGCTAAGCAACTGTTGAAAAGAGTTCAATGGCCCAAGCTGAAAGTGATGCTTCAA
GTAGTCGGAGGAAAAACATC

Downstream 100 bases:

>100_bases
TGATTGATGGCTAGTGCAAATCGGAGGATCACTTATGGTCAAAGTTTCAATCATTATTCCTGCTTACAATGCTGCTGCCA
CTCTAAATCGCGCTGTTCAG

Product: glycosyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MMISVCMATYNGARFVGAQLKSILDQLGSNDEVIVVDDHSTDETVAVIDQFKDSRIKLIENTTNHGPIYGFMTALNYAKG
DYLFLSDQDDVWFPNKVTRVMTAFEKEKAVVVVHDGIVTDQSLSRVDDSWNHFSHRVPSQSMIKTLIKNGYTGAMMAFSR
ELLPLVLPFPKQVPMHDWWIALVAMKHHMKIVVLPDKLMYYRRHAGNVTGSHRKLHEMMAFRFNMLRLFIRA

Sequences:

>Translated_232_residues
MMISVCMATYNGARFVGAQLKSILDQLGSNDEVIVVDDHSTDETVAVIDQFKDSRIKLIENTTNHGPIYGFMTALNYAKG
DYLFLSDQDDVWFPNKVTRVMTAFEKEKAVVVVHDGIVTDQSLSRVDDSWNHFSHRVPSQSMIKTLIKNGYTGAMMAFSR
ELLPLVLPFPKQVPMHDWWIALVAMKHHMKIVVLPDKLMYYRRHAGNVTGSHRKLHEMMAFRFNMLRLFIRA
>Mature_232_residues
MMISVCMATYNGARFVGAQLKSILDQLGSNDEVIVVDDHSTDETVAVIDQFKDSRIKLIENTTNHGPIYGFMTALNYAKG
DYLFLSDQDDVWFPNKVTRVMTAFEKEKAVVVVHDGIVTDQSLSRVDDSWNHFSHRVPSQSMIKTLIKNGYTGAMMAFSR
ELLPLVLPFPKQVPMHDWWIALVAMKHHMKIVVLPDKLMYYRRHAGNVTGSHRKLHEMMAFRFNMLRLFIRA

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 26622; Mature: 26622

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMISVCMATYNGARFVGAQLKSILDQLGSNDEVIVVDDHSTDETVAVIDQFKDSRIKLIE
CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEE
NTTNHGPIYGFMTALNYAKGDYLFLSDQDDVWFPNKVTRVMTAFEKEKAVVVVHDGIVTD
CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCEECC
QSLSRVDDSWNHFSHRVPSQSMIKTLIKNGYTGAMMAFSRELLPLVLPFPKQVPMHDWWI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCHHHHH
ALVAMKHHMKIVVLPDKLMYYRRHAGNVTGSHRKLHEMMAFRFNMLRLFIRA
HHHHHHHCCEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMISVCMATYNGARFVGAQLKSILDQLGSNDEVIVVDDHSTDETVAVIDQFKDSRIKLIE
CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEE
NTTNHGPIYGFMTALNYAKGDYLFLSDQDDVWFPNKVTRVMTAFEKEKAVVVVHDGIVTD
CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCEECC
QSLSRVDDSWNHFSHRVPSQSMIKTLIKNGYTGAMMAFSRELLPLVLPFPKQVPMHDWWI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCHHHHH
ALVAMKHHMKIVVLPDKLMYYRRHAGNVTGSHRKLHEMMAFRFNMLRLFIRA
HHHHHHHCCEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840; 2111805 [H]