| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is yieG [C]
Identifier: 116493723
GI number: 116493723
Start: 149911
End: 151368
Strand: Direct
Name: yieG [C]
Synonym: LSEI_0151
Alternate gene names: 116493723
Gene position: 149911-151368 (Clockwise)
Preceding gene: 116493720
Following gene: 116493724
Centisome position: 5.18
GC content: 49.73
Gene sequence:
>1458_bases ATGGAAAACTTTTTTCATTTGAAAGACAATAAGACCACGCCAATGACCGAGGTCATGGCAGGTCTAACCACATTTTTTGC AATGTCATATATTTTATTCGTTAATCCCCAAGTCCTATCACAGACAGGGATGCCGGCACAGGCCGTTTTCTTGGCAACGA TCATTGCCAGTGCAGTCGGAACGCTGGTCATGGGTCTTTTCGCTAATGTGCCGTACGCGTTGGCACCAGGCATGGGACTC AATGCTTTCTTCACTTATACGGTTGTTTTCGCGCTGGGATTCAGTTGGCAAGAAGCCTTGGCGCTGGTCTTCATTTGTGG CGTGATCAACATTTTAATCACTGTCACCAAAATTCGGAAATTAATCATTGTCGCGATTCCAGAAACCATCCAGCATGCGA TTGGCGGTGGGATCGGGGTCTTCGTGGCTTACATTGGGATCAAGAACGCCGGCTTCTTACAATTTACTTCTGAAGCTTCC AGCATTAACACCATCAACGGCCAACCGTTGAAGGCGGGCGCACTGACGCTCAAACATGGAGTTGAATCGGTTGTTTCCAA CGGTGGCATTGTGCCGGCACTGGTTAACTTCACCCAAGCCGGCGCTTTGCTGGCCCTGATTGGTTTGATCATCATGGTTA TTCTGAACGTCAAAAAAGTTCCCGGCGCAATTCTGATCGGGATTCTGCTGACGACCATCATTGGGATTCCAATGGGCGTG ACCAACTTGCATCTGAGCGCTGCAAATTCCTTTAGCAGCACTTTTGCATCATTGCAGACAACCTTTGGCGCCGCTTTTTC CGCTAAGGGGATGGGATCGTTATTTACCAGCCCAGACAAAATTGCCCTGTCAATCATGACCATTTTTGCTTTCAGTTTCT CCGACATTTTCGACACATTGGGAACCTTCATCGGCACAGGCCGGCGCACCGGGATTTTCTCGGATGCTGACGAACGTGCT CTGGAACAAGGTTCAGGCTTCTCGTCTAAAATGGATCGCGCCCTGTTTGCAGATTCAATTGCGACAGGTGTTGGCTCCAT CTTCGGTACCAGTAACGTCACGACCTATGTTGAAAGTGCTGCCGGCATCGGTGCTGGTGGCCGAACTGGGCTGACTTCGG TTGTCGTTGCCGGCATGTTCCTGCTCAGCTCAGTCTTTGCGCCATTCATCGCCATTGTACCGACCCAAGCTTTGGCACCT GCCTTGATCTTGGTCGGGATCATGATGATGAGCACCTTCAAGGAAATCGAATGGGAAGATCTTTCCCAAGCCGTTCCGGC CTTCATGGCATCCATCGTCATGGGCTTTGTCTACAACATCTCATACGGGATCGCGGCAGGCTTCATTTTCTATTGCCTGA TCAAGCTGATCACCGGCAAGGTTAAGGAAATCCACCCAGTTTTGGCAATTGTCACAATCGGGTTCATTCTGAACTTCGTG ATTCTGGCATCGCTGTAA
Upstream 100 bases:
>100_bases AACATTAATCATAAAAAAAAGAAAAATAAACGTATTTTCTATTGCAACTGTCGTCAGTCTCGGGTACACTTTTCATATTC ACAGTTTAGGGGAGCGTGTC
Downstream 100 bases:
>100_bases CACACAACTAACGGCTGTCTTTTAAAAGAAGCTGAAACAGACACTGCCACTGCGCTGTAACCAAACGCGCAGGCGGCAAT CTGTTTCAGCTTCTTTTTGA
Product: xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MENFFHLKDNKTTPMTEVMAGLTTFFAMSYILFVNPQVLSQTGMPAQAVFLATIIASAVGTLVMGLFANVPYALAPGMGL NAFFTYTVVFALGFSWQEALALVFICGVINILITVTKIRKLIIVAIPETIQHAIGGGIGVFVAYIGIKNAGFLQFTSEAS SINTINGQPLKAGALTLKHGVESVVSNGGIVPALVNFTQAGALLALIGLIIMVILNVKKVPGAILIGILLTTIIGIPMGV TNLHLSAANSFSSTFASLQTTFGAAFSAKGMGSLFTSPDKIALSIMTIFAFSFSDIFDTLGTFIGTGRRTGIFSDADERA LEQGSGFSSKMDRALFADSIATGVGSIFGTSNVTTYVESAAGIGAGGRTGLTSVVVAGMFLLSSVFAPFIAIVPTQALAP ALILVGIMMMSTFKEIEWEDLSQAVPAFMASIVMGFVYNISYGIAAGFIFYCLIKLITGKVKEIHPVLAIVTIGFILNFV ILASL
Sequences:
>Translated_485_residues MENFFHLKDNKTTPMTEVMAGLTTFFAMSYILFVNPQVLSQTGMPAQAVFLATIIASAVGTLVMGLFANVPYALAPGMGL NAFFTYTVVFALGFSWQEALALVFICGVINILITVTKIRKLIIVAIPETIQHAIGGGIGVFVAYIGIKNAGFLQFTSEAS SINTINGQPLKAGALTLKHGVESVVSNGGIVPALVNFTQAGALLALIGLIIMVILNVKKVPGAILIGILLTTIIGIPMGV TNLHLSAANSFSSTFASLQTTFGAAFSAKGMGSLFTSPDKIALSIMTIFAFSFSDIFDTLGTFIGTGRRTGIFSDADERA LEQGSGFSSKMDRALFADSIATGVGSIFGTSNVTTYVESAAGIGAGGRTGLTSVVVAGMFLLSSVFAPFIAIVPTQALAP ALILVGIMMMSTFKEIEWEDLSQAVPAFMASIVMGFVYNISYGIAAGFIFYCLIKLITGKVKEIHPVLAIVTIGFILNFV ILASL >Mature_485_residues MENFFHLKDNKTTPMTEVMAGLTTFFAMSYILFVNPQVLSQTGMPAQAVFLATIIASAVGTLVMGLFANVPYALAPGMGL NAFFTYTVVFALGFSWQEALALVFICGVINILITVTKIRKLIIVAIPETIQHAIGGGIGVFVAYIGIKNAGFLQFTSEAS SINTINGQPLKAGALTLKHGVESVVSNGGIVPALVNFTQAGALLALIGLIIMVILNVKKVPGAILIGILLTTIIGIPMGV TNLHLSAANSFSSTFASLQTTFGAAFSAKGMGSLFTSPDKIALSIMTIFAFSFSDIFDTLGTFIGTGRRTGIFSDADERA LEQGSGFSSKMDRALFADSIATGVGSIFGTSNVTTYVESAAGIGAGGRTGLTSVVVAGMFLLSSVFAPFIAIVPTQALAP ALILVGIMMMSTFKEIEWEDLSQAVPAFMASIVMGFVYNISYGIAAGFIFYCLIKLITGKVKEIHPVLAIVTIGFILNFV ILASL
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=480, Percent_Identity=38.75, Blast_Score=290, Evalue=1e-79, Organism=Escherichia coli, GI87082309, Length=484, Percent_Identity=34.297520661157, Blast_Score=285, Evalue=4e-78, Organism=Escherichia coli, GI1790499, Length=469, Percent_Identity=30.4904051172708, Blast_Score=187, Evalue=2e-48, Organism=Escherichia coli, GI48994909, Length=465, Percent_Identity=30.752688172043, Blast_Score=174, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 50861; Mature: 50861
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFFHLKDNKTTPMTEVMAGLTTFFAMSYILFVNPQVLSQTGMPAQAVFLATIIASAVG CCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHH TLVMGLFANVPYALAPGMGLNAFFTYTVVFALGFSWQEALALVFICGVINILITVTKIRK HHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LIIVAIPETIQHAIGGGIGVFVAYIGIKNAGFLQFTSEASSINTINGQPLKAGALTLKHG HHHEECCHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH VESVVSNGGIVPALVNFTQAGALLALIGLIIMVILNVKKVPGAILIGILLTTIIGIPMGV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH TNLHLSAANSFSSTFASLQTTFGAAFSAKGMGSLFTSPDKIALSIMTIFAFSFSDIFDTL HHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GTFIGTGRRTGIFSDADERALEQGSGFSSKMDRALFADSIATGVGSIFGTSNVTTYVESA HHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AGIGAGGRTGLTSVVVAGMFLLSSVFAPFIAIVPTQALAPALILVGIMMMSTFKEIEWED CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHH LSQAVPAFMASIVMGFVYNISYGIAAGFIFYCLIKLITGKVKEIHPVLAIVTIGFILNFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH ILASL HHHCC >Mature Secondary Structure MENFFHLKDNKTTPMTEVMAGLTTFFAMSYILFVNPQVLSQTGMPAQAVFLATIIASAVG CCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHH TLVMGLFANVPYALAPGMGLNAFFTYTVVFALGFSWQEALALVFICGVINILITVTKIRK HHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LIIVAIPETIQHAIGGGIGVFVAYIGIKNAGFLQFTSEASSINTINGQPLKAGALTLKHG HHHEECCHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH VESVVSNGGIVPALVNFTQAGALLALIGLIIMVILNVKKVPGAILIGILLTTIIGIPMGV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH TNLHLSAANSFSSTFASLQTTFGAAFSAKGMGSLFTSPDKIALSIMTIFAFSFSDIFDTL HHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GTFIGTGRRTGIFSDADERALEQGSGFSSKMDRALFADSIATGVGSIFGTSNVTTYVESA HHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AGIGAGGRTGLTSVVVAGMFLLSSVFAPFIAIVPTQALAPALILVGIMMMSTFKEIEWED CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHH LSQAVPAFMASIVMGFVYNISYGIAAGFIFYCLIKLITGKVKEIHPVLAIVTIGFILNFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH ILASL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]