The gene/protein map for NC_009972 is currently unavailable.
Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493651

Identifier: 116493651

GI number: 116493651

Start: 75083

End: 76222

Strand: Direct

Name: 116493651

Synonym: LSEI_0079

Alternate gene names: NA

Gene position: 75083-76222 (Clockwise)

Preceding gene: 116493645

Following gene: 116493653

Centisome position: 2.59

GC content: 45.35

Gene sequence:

>1140_bases
ATGATGAACAAAAAGTTGAGCGTGGCAGTGTTGGTGCTCGGATGTTTGAGCTTACTGGCTGCTTGTCAACCGAGTAACGT
TGTGAGCAAGGTTAAGCAGCATACAGTGACCGTTTTAAACCAAAAGGATCAAGTGTGGCGCGAAACTGAGGCGGTTTCTG
CCACGGTAACGAGTCAGGGGAGTTTGAAAAACGAGCAAGTAAAACCGGACAACAAGTTGTCACCTGCTATCACGAATGCC
GGTAAATTTTACAGTGTCGCTACTTTCAAACAGAGCGATTATGCCACGATCAAAAAGGCTATTCAGAAAAATGAAGCACA
GCCTAAGACACTCCGCTTCGTCACAGTGAAGCAAGTGAATGCGACGCTTAAAGCGATGGGGGCAACCAAACAGATTAAAG
CATTAACGGATTTGGTCTATACACAACAAGCGGATGGTCACACTTTTCCTAGTAATGATGGCTATCTCATTGAAGGCGAT
CATTTGTATGAAGTGATCATGGCTTACACGACAGGGGGTAATGCTAGTACCGTCAATCGCGGCAATGTTTACTCGCGGAA
AATCAAGTACGGGACAACTAAGCAACTGACTTTCAATGAAGTGGCCGGCACTTGGCAAAGTACTGCAGGCGATCAAGCTA
CCGTGCGAGATGATCAATTGGTGACCATTCAGAACAAGTCGTATGTTCGCGGCAAAGTTGAAAATCTAAGTCACTTGCAA
GGAGAAAAGTTATATCGAAACACGGCGTACTCCCTGCGACAGACTCAACTGGTCAAGCAAAATGCTAAGTTGACCCAGGA
ATCATTGGTGGCGGGCGACTTGTATGACAATATGTATCTATTCCTATCAAAGACAAAGATGGCACGTGTGAATACTAGCG
GCGTGACCATTTTTACGAAAAAGGCAGATCAAAGCCAGATTCCTGCTCAAGTCTTTGAGGTTTTTCGGTTATTAGACCAG
CGCCATACAGACGAAGTCGCAGCTTATTTATTACCGCACGGGACTGACACTTATTCTGTGGCACTAACTCGTAGCATCAA
CTATGCAACGGTAAATTATGAAGGCGGCGCAACGGGAGCAGAATCAGTGTCGATTCAGGATGGCAAAATTAGTGTTGGAC
CAGACTTAAATCACAATTGA

Upstream 100 bases:

>100_bases
TAAAACGAGGATGTTCTAACGGCACGATTGTTTCAAGAATAATAGAAGCTTAGACTCAGTAACAATAGCAGCAGCACCTA
GACGTGGAGAAGGAGAAATG

Downstream 100 bases:

>100_bases
GCATGACTCACAACTTTACTCGCCCCAGTCAAAAATAAAAATTGGTCCATACTCAAAAAACATCAGCAGGCAGTGGTTGG
GGCAACTGCATTGCTGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MMNKKLSVAVLVLGCLSLLAACQPSNVVSKVKQHTVTVLNQKDQVWRETEAVSATVTSQGSLKNEQVKPDNKLSPAITNA
GKFYSVATFKQSDYATIKKAIQKNEAQPKTLRFVTVKQVNATLKAMGATKQIKALTDLVYTQQADGHTFPSNDGYLIEGD
HLYEVIMAYTTGGNASTVNRGNVYSRKIKYGTTKQLTFNEVAGTWQSTAGDQATVRDDQLVTIQNKSYVRGKVENLSHLQ
GEKLYRNTAYSLRQTQLVKQNAKLTQESLVAGDLYDNMYLFLSKTKMARVNTSGVTIFTKKADQSQIPAQVFEVFRLLDQ
RHTDEVAAYLLPHGTDTYSVALTRSINYATVNYEGGATGAESVSIQDGKISVGPDLNHN

Sequences:

>Translated_379_residues
MMNKKLSVAVLVLGCLSLLAACQPSNVVSKVKQHTVTVLNQKDQVWRETEAVSATVTSQGSLKNEQVKPDNKLSPAITNA
GKFYSVATFKQSDYATIKKAIQKNEAQPKTLRFVTVKQVNATLKAMGATKQIKALTDLVYTQQADGHTFPSNDGYLIEGD
HLYEVIMAYTTGGNASTVNRGNVYSRKIKYGTTKQLTFNEVAGTWQSTAGDQATVRDDQLVTIQNKSYVRGKVENLSHLQ
GEKLYRNTAYSLRQTQLVKQNAKLTQESLVAGDLYDNMYLFLSKTKMARVNTSGVTIFTKKADQSQIPAQVFEVFRLLDQ
RHTDEVAAYLLPHGTDTYSVALTRSINYATVNYEGGATGAESVSIQDGKISVGPDLNHN
>Mature_379_residues
MMNKKLSVAVLVLGCLSLLAACQPSNVVSKVKQHTVTVLNQKDQVWRETEAVSATVTSQGSLKNEQVKPDNKLSPAITNA
GKFYSVATFKQSDYATIKKAIQKNEAQPKTLRFVTVKQVNATLKAMGATKQIKALTDLVYTQQADGHTFPSNDGYLIEGD
HLYEVIMAYTTGGNASTVNRGNVYSRKIKYGTTKQLTFNEVAGTWQSTAGDQATVRDDQLVTIQNKSYVRGKVENLSHLQ
GEKLYRNTAYSLRQTQLVKQNAKLTQESLVAGDLYDNMYLFLSKTKMARVNTSGVTIFTKKADQSQIPAQVFEVFRLLDQ
RHTDEVAAYLLPHGTDTYSVALTRSINYATVNYEGGATGAESVSIQDGKISVGPDLNHN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41697; Mature: 41697

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNKKLSVAVLVLGCLSLLAACQPSNVVSKVKQHTVTVLNQKDQVWRETEAVSATVTSQG
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHEEEEECCC
SLKNEQVKPDNKLSPAITNAGKFYSVATFKQSDYATIKKAIQKNEAQPKTLRFVTVKQVN
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEEHHHH
ATLKAMGATKQIKALTDLVYTQQADGHTFPSNDGYLIEGDHLYEVIMAYTTGGNASTVNR
HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHEEEEEEEECCCCCCCCCC
GNVYSRKIKYGTTKQLTFNEVAGTWQSTAGDQATVRDDQLVTIQNKSYVRGKVENLSHLQ
CCCEEEEEECCCCCCEEHHHHCCCCCCCCCCCCEECCCEEEEECCCCEEHHHHHHHHHHC
GEKLYRNTAYSLRQTQLVKQNAKLTQESLVAGDLYDNMYLFLSKTKMARVNTSGVTIFTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCCEEEEEE
KADQSQIPAQVFEVFRLLDQRHTDEVAAYLLPHGTDTYSVALTRSINYATVNYEGGATGA
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCCCCCC
ESVSIQDGKISVGPDLNHN
CEEEEECCEEEECCCCCCC
>Mature Secondary Structure
MMNKKLSVAVLVLGCLSLLAACQPSNVVSKVKQHTVTVLNQKDQVWRETEAVSATVTSQG
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHEEEEECCC
SLKNEQVKPDNKLSPAITNAGKFYSVATFKQSDYATIKKAIQKNEAQPKTLRFVTVKQVN
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEEHHHH
ATLKAMGATKQIKALTDLVYTQQADGHTFPSNDGYLIEGDHLYEVIMAYTTGGNASTVNR
HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHEEEEEEEECCCCCCCCCC
GNVYSRKIKYGTTKQLTFNEVAGTWQSTAGDQATVRDDQLVTIQNKSYVRGKVENLSHLQ
CCCEEEEEECCCCCCEEHHHHCCCCCCCCCCCCEECCCEEEEECCCCEEHHHHHHHHHHC
GEKLYRNTAYSLRQTQLVKQNAKLTQESLVAGDLYDNMYLFLSKTKMARVNTSGVTIFTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCCEEEEEE
KADQSQIPAQVFEVFRLLDQRHTDEVAAYLLPHGTDTYSVALTRSINYATVNYEGGATGA
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCCCCCC
ESVSIQDGKISVGPDLNHN
CEEEEECCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA