| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116493643
Identifier: 116493643
GI number: 116493643
Start: 67624
End: 67851
Strand: Direct
Name: 116493643
Synonym: LSEI_0071
Alternate gene names: NA
Gene position: 67624-67851 (Clockwise)
Preceding gene: 116493642
Following gene: 116493644
Centisome position: 2.34
GC content: 44.3
Gene sequence:
>228_bases ATGACAAAATTAGTTTATCAATTAGATGGTTTAACCTGCCCAAGTTGCTTGCAGAAAATTGAAGGCGCATTAGGCCAGCA AGCCGGTGTCAAAACAGTGAAAGCCTTGTTTAACAGTAGCAAGGTCAAGGCTCAGATTGATCCAAGCGTGACCAACGCCG ATGTTTTGAAAAAGACGATCACGGACTTGGGTTATACCGTTGTGAACGTGCGCAGTCAAGAAGCATAG
Upstream 100 bases:
>100_bases CGGCACACCCCCCGGAAGTTACAAAACTTGACGACGATCAAGGACGCCGCAGCACAAACTGTTAATAATGAAGGTAAATA AACAAGAAAGGATTTTTAAC
Downstream 100 bases:
>100_bases AGCGAGAACTGGCGCGGTTAGAAACCGGAGCATAAGCAGCCTTGGGTGTGGTGGCTGGGCCAATTACCCCCAAGGTCCTT ATGGAGGAGGTTTCGATGCT
Product: copper chaperone
Products: NA
Alternate protein names: Copper-Translocating P-Type ATPase; Heavy Metal Transport/Detoxification Protein
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MTKLVYQLDGLTCPSCLQKIEGALGQQAGVKTVKALFNSSKVKAQIDPSVTNADVLKKTITDLGYTVVNVRSQEA
Sequences:
>Translated_75_residues MTKLVYQLDGLTCPSCLQKIEGALGQQAGVKTVKALFNSSKVKAQIDPSVTNADVLKKTITDLGYTVVNVRSQEA >Mature_74_residues TKLVYQLDGLTCPSCLQKIEGALGQQAGVKTVKALFNSSKVKAQIDPSVTNADVLKKTITDLGYTVVNVRSQEA
Specific function: Unknown
COG id: COG2608
COG function: function code P; Copper chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8026; Mature: 7895
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS01047 HMA_1 ; PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLVYQLDGLTCPSCLQKIEGALGQQAGVKTVKALFNSSKVKAQIDPSVTNADVLKKTI CCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH TDLGYTVVNVRSQEA HHCCHHEEEECCCCC >Mature Secondary Structure TKLVYQLDGLTCPSCLQKIEGALGQQAGVKTVKALFNSSKVKAQIDPSVTNADVLKKTI CCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH TDLGYTVVNVRSQEA HHCCHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA