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The map label for this gene is 116493549

Identifier: 116493549

GI number: 116493549

Start: 1804064

End: 1804384

Strand: Direct

Name: 116493549

Synonym: PEPE_1823

Alternate gene names: NA

Gene position: 1804064-1804384 (Clockwise)

Preceding gene: 116493548

Following gene: 116493550

Centisome position: 98.45

GC content: 36.45

Gene sequence:

>321_bases
ATGGCAATCCAAATTCCAACCGAATTGCTAGACGGTAGCGTTTTGGGAATATTAAATCATGGAGATTACTATGGTTATGC
TCTGACACAGAAAGTTCAAGCAGACTTTCCGATTTCCGAATCAACCATGTATCCTGTCTTACGCCGTTTAAAAAAGAATA
ATTATTTAACAACCTATGATGAACCCTATCAAGGACGTAATCGAAGGTATTACAAGATAACTCAAGCAGGTAAAGTTCGT
TTGGCTGAAATTCAAGCAGAATGGATTACCTTCAAAAATAGGATTGATAAACTAGTTTCAAGGGGTGATTTGAATGAATG
A

Upstream 100 bases:

>100_bases
GAACTTCAACCCCCAAGCTTGTAAATAAGCTTGGGGGTTTTCTTTACTATTTTAATCATTTATAATACTATATGAGATAT
AGTATTATGGAGGTGAGCAT

Downstream 100 bases:

>100_bases
TTACATTGAAGAATTAGAGTCCCATTTATCTCCGCTCACGCGCGCAGAACGGTCTGACGTGATTGAGTTTTATAGCGAAT
ATTTACAAGATAGTGGCTTG

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family; PadR-Like Family Transcriptional Regulator; Transcription Regulator; PadR Family Regulatory Protein; Transcriptional Regulator PadR Family Protein; Protein RBAM; PadR Transcriptional Regulator; ParR Family Transcriptional Regulator; Ypothetical Protein SMU.

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MAIQIPTELLDGSVLGILNHGDYYGYALTQKVQADFPISESTMYPVLRRLKKNNYLTTYDEPYQGRNRRYYKITQAGKVR
LAEIQAEWITFKNRIDKLVSRGDLNE

Sequences:

>Translated_106_residues
MAIQIPTELLDGSVLGILNHGDYYGYALTQKVQADFPISESTMYPVLRRLKKNNYLTTYDEPYQGRNRRYYKITQAGKVR
LAEIQAEWITFKNRIDKLVSRGDLNE
>Mature_105_residues
AIQIPTELLDGSVLGILNHGDYYGYALTQKVQADFPISESTMYPVLRRLKKNNYLTTYDEPYQGRNRRYYKITQAGKVRL
AEIQAEWITFKNRIDKLVSRGDLNE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12348; Mature: 12217

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQIPTELLDGSVLGILNHGDYYGYALTQKVQADFPISESTMYPVLRRLKKNNYLTTYD
CEEECCHHHHCCEEEEEEECCCEECEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCC
EPYQGRNRRYYKITQAGKVRLAEIQAEWITFKNRIDKLVSRGDLNE
CCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AIQIPTELLDGSVLGILNHGDYYGYALTQKVQADFPISESTMYPVLRRLKKNNYLTTYD
EEECCHHHHCCEEEEEEECCCEECEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCC
EPYQGRNRRYYKITQAGKVRLAEIQAEWITFKNRIDKLVSRGDLNE
CCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA