Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is gpmA [H]

Identifier: 116493433

GI number: 116493433

Start: 1683216

End: 1683824

Strand: Direct

Name: gpmA [H]

Synonym: PEPE_1705

Alternate gene names: 116493433

Gene position: 1683216-1683824 (Clockwise)

Preceding gene: 116493424

Following gene: 116493440

Centisome position: 91.86

GC content: 39.9

Gene sequence:

>609_bases
GTGGATTTAACAATTGTACGACATAGTATTAGTAGCGATAACGGTCGCGGATTAATTTCGGGGGCTGGTTCTGATGTTGA
TCTTTCAGAAGCTGGAATCGAGTTAGCCCAAGAGGCTCAACGTGCTTTTGACTGGAATCAATTTGATCAAGTTTTCTCTA
GTCCCATGCGTCGGGCTAAACAAACGGCCGAATTACTCTTAGGTGACCAAGCTTCAGCGATTAATTTTGATGAACGTTTA
ACTGAAATGAATTTTGGAGACTGGGATGGAACTGCCGAAGACGCAATTTTTGAACAATATCCTGAAATTTTCAATCAAAT
GGGAATGTTTAATGAGAAGTATTCCGATTATGCACCCAATTCAGAAAGTTACGATGAGCTGGTTAACCGCGTAACAGGCT
TTTTAGATGAATTGAAGCAAAAATATCCGACTGCATCAATCCTACTCATTTGTCACGGAATGACTACGCGAGCCCTCTTT
GCTGCCTTACTCCACGTCAGTCCTGCCCAATTTGGTAAGATTGGCAACGTTACTCTAAATCAAATTCATCTAGATGAAAC
TAATCATTTTGAACCCCGCATTGATCTTTACAATCAAAAATTAAATTAA

Upstream 100 bases:

>100_bases
CAAAACATATCTAAACTAGAAAAATACTCTCAATGTCTAAGTTATGGTATCATCGTAAATGTAAGCGTATTAACAAACAA
AAACGGCGGTGACTTAAACA

Downstream 100 bases:

>100_bases
AAAACGGATTGAAGCCTCCAACATCATGAAGGTTTCAATCCATTTTTTATTTACACACTAGCTTTCGAATTTAGATATTT
CTTTTCTGCTTCCTTTCGGG

Product: fructose-2,6-bisphosphatase

Products: NA

Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MDLTIVRHSISSDNGRGLISGAGSDVDLSEAGIELAQEAQRAFDWNQFDQVFSSPMRRAKQTAELLLGDQASAINFDERL
TEMNFGDWDGTAEDAIFEQYPEIFNQMGMFNEKYSDYAPNSESYDELVNRVTGFLDELKQKYPTASILLICHGMTTRALF
AALLHVSPAQFGKIGNVTLNQIHLDETNHFEPRIDLYNQKLN

Sequences:

>Translated_202_residues
MDLTIVRHSISSDNGRGLISGAGSDVDLSEAGIELAQEAQRAFDWNQFDQVFSSPMRRAKQTAELLLGDQASAINFDERL
TEMNFGDWDGTAEDAIFEQYPEIFNQMGMFNEKYSDYAPNSESYDELVNRVTGFLDELKQKYPTASILLICHGMTTRALF
AALLHVSPAQFGKIGNVTLNQIHLDETNHFEPRIDLYNQKLN
>Mature_202_residues
MDLTIVRHSISSDNGRGLISGAGSDVDLSEAGIELAQEAQRAFDWNQFDQVFSSPMRRAKQTAELLLGDQASAINFDERL
TEMNFGDWDGTAEDAIFEQYPEIFNQMGMFNEKYSDYAPNSESYDELVNRVTGFLDELKQKYPTASILLICHGMTTRALF
AALLHVSPAQFGKIGNVTLNQIHLDETNHFEPRIDLYNQKLN

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786857, Length=164, Percent_Identity=29.2682926829268, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR005952 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 22764; Mature: 22764

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLTIVRHSISSDNGRGLISGAGSDVDLSEAGIELAQEAQRAFDWNQFDQVFSSPMRRAK
CCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QTAELLLGDQASAINFDERLTEMNFGDWDGTAEDAIFEQYPEIFNQMGMFNEKYSDYAPN
HHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
SESYDELVNRVTGFLDELKQKYPTASILLICHGMTTRALFAALLHVSPAQFGKIGNVTLN
CCCHHHHHHHHHHHHHHHHHHCCCCEEHEEECCHHHHHHHHHHHHCCHHHHCCCCCCEEE
QIHLDETNHFEPRIDLYNQKLN
EEECCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MDLTIVRHSISSDNGRGLISGAGSDVDLSEAGIELAQEAQRAFDWNQFDQVFSSPMRRAK
CCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QTAELLLGDQASAINFDERLTEMNFGDWDGTAEDAIFEQYPEIFNQMGMFNEKYSDYAPN
HHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
SESYDELVNRVTGFLDELKQKYPTASILLICHGMTTRALFAALLHVSPAQFGKIGNVTLN
CCCHHHHHHHHHHHHHHHHHHCCCCEEHEEECCHHHHHHHHHHHHCCHHHHCCCCCCEEE
QIHLDETNHFEPRIDLYNQKLN
EEECCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA