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The map label for this gene is yrkL [H]

Identifier: 116493393

GI number: 116493393

Start: 1651388

End: 1652071

Strand: Direct

Name: yrkL [H]

Synonym: PEPE_1665

Alternate gene names: 116493393

Gene position: 1651388-1652071 (Clockwise)

Preceding gene: 116493392

Following gene: 116493394

Centisome position: 90.12

GC content: 40.79

Gene sequence:

>684_bases
ATGCAAACTTTGATTATCGTCGCACATCCAGAACTTGCAAGGTCTAATACTCAGCCCTTTTTTAAAGCGGCTATCGAGAA
TTTTTCAAATGTAACTTGGCATCCCTTAGTTGCAGATTTTAACGTCGAACAAGAACAATCTTTATTACTCCAAAATGATC
GCATTATTCTAGAATTTCCGTTGTACTGGTATAGTGCCCCTGCATTACTAAAGCAATGGATGGACACCGTTATGACCACT
AAATTTGCCACTGGTCATCAATATGCTTTGGAAGGTAAAGAACTAGGAATTGTGGTTTCGACTGGAGACAATGGGAATGC
TTTCCAAGCTGGGGCAGCCGAAAAATTCACCATATCAGAATTAATGCGTCCTTTTGAAGCATTTGCCAATAAAACTAAGA
TGATGTATCTCCCAATATTGGCCGTCCACCAGTTTTTATACCTAGAACCTGATGCCCAACAACGCTTGTTGGTTGCTTAC
CAGCAATACGCTACGAACGTTGGTGCAGGGCACTTTAAAGACCAGGCCGCTTGGTATGAGACAGAATTACAAAAACGGAT
TGAGCAACATCCGCCACATTCTGAGCAGCTTCAACAAATTTTATTCACTATTAAAGAGCGCCAGGATGAACTCGACGATT
TACAATGGAATTTGATTGAAATGAAAAAAGAGGAGGATGTGTGA

Upstream 100 bases:

>100_bases
CCATAATTTTGTTCCTTTAGAACGCTTTACTAAGGAATTTATTTCAGATGAAATGCTGGAAATAGCTATCAAAAAATTTA
AAGAGGAGGCGGTTTAGTGC

Downstream 100 bases:

>100_bases
TGGATGATCAAAAATGGTTAATTGAACAAATTGAACAGCTCCGTCAATCCGCTTCAGACTATCGAGAACAGTCCTTTTAT
CTAGGATTAAAAGACTTTGT

Product: putative NADPH-quinone reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MQTLIIVAHPELARSNTQPFFKAAIENFSNVTWHPLVADFNVEQEQSLLLQNDRIILEFPLYWYSAPALLKQWMDTVMTT
KFATGHQYALEGKELGIVVSTGDNGNAFQAGAAEKFTISELMRPFEAFANKTKMMYLPILAVHQFLYLEPDAQQRLLVAY
QQYATNVGAGHFKDQAAWYETELQKRIEQHPPHSEQLQQILFTIKERQDELDDLQWNLIEMKKEEDV

Sequences:

>Translated_227_residues
MQTLIIVAHPELARSNTQPFFKAAIENFSNVTWHPLVADFNVEQEQSLLLQNDRIILEFPLYWYSAPALLKQWMDTVMTT
KFATGHQYALEGKELGIVVSTGDNGNAFQAGAAEKFTISELMRPFEAFANKTKMMYLPILAVHQFLYLEPDAQQRLLVAY
QQYATNVGAGHFKDQAAWYETELQKRIEQHPPHSEQLQQILFTIKERQDELDDLQWNLIEMKKEEDV
>Mature_227_residues
MQTLIIVAHPELARSNTQPFFKAAIENFSNVTWHPLVADFNVEQEQSLLLQNDRIILEFPLYWYSAPALLKQWMDTVMTT
KFATGHQYALEGKELGIVVSTGDNGNAFQAGAAEKFTISELMRPFEAFANKTKMMYLPILAVHQFLYLEPDAQQRLLVAY
QQYATNVGAGHFKDQAAWYETELQKRIEQHPPHSEQLQQILFTIKERQDELDDLQWNLIEMKKEEDV

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Escherichia coli, GI1789750, Length=146, Percent_Identity=35.6164383561644, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786231, Length=146, Percent_Identity=35.6164383561644, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 26279; Mature: 26279

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLIIVAHPELARSNTQPFFKAAIENFSNVTWHPLVADFNVEQEQSLLLQNDRIILEFP
CCEEEEEECCHHHCCCCCHHHHHHHHHCCCCEECEEEECCCCCHHHHHHHCCCCEEEEEC
LYWYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNGNAFQAGAAEKFTISE
HHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECCCCCCEECCCCCCEEHHH
LMRPFEAFANKTKMMYLPILAVHQFLYLEPDAQQRLLVAYQQYATNVGAGHFKDQAAWYE
HHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
TELQKRIEQHPPHSEQLQQILFTIKERQDELDDLQWNLIEMKKEEDV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQTLIIVAHPELARSNTQPFFKAAIENFSNVTWHPLVADFNVEQEQSLLLQNDRIILEFP
CCEEEEEECCHHHCCCCCHHHHHHHHHCCCCEECEEEECCCCCHHHHHHHCCCCEEEEEC
LYWYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNGNAFQAGAAEKFTISE
HHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECCCCCCEECCCCCCEEHHH
LMRPFEAFANKTKMMYLPILAVHQFLYLEPDAQQRLLVAYQQYATNVGAGHFKDQAAWYE
HHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
TELQKRIEQHPPHSEQLQQILFTIKERQDELDDLQWNLIEMKKEEDV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]