| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493394
Identifier: 116493394
GI number: 116493394
Start: 1652071
End: 1652235
Strand: Direct
Name: 116493394
Synonym: PEPE_1666
Alternate gene names: NA
Gene position: 1652071-1652235 (Clockwise)
Preceding gene: 116493393
Following gene: 116493402
Centisome position: 90.16
GC content: 36.97
Gene sequence:
>165_bases ATGGATGATCAAAAATGGTTAATTGAACAAATTGAACAGCTCCGTCAATCCGCTTCAGACTATCGAGAACAGTCCTTTTA TCTAGGATTAAAAGACTTTGTTCAGGAACAATCGAAAAGAATCGACCAAACTCAAAGAGAATTAGACGGAAGAATGTGGG AATGA
Upstream 100 bases:
>100_bases AGCAGCTTCAACAAATTTTATTCACTATTAAAGAGCGCCAGGATGAACTCGACGATTTACAATGGAATTTGATTGAAATG AAAAAAGAGGAGGATGTGTG
Downstream 100 bases:
>100_bases TTTCACTAAGACAAATATATCCCAGCAATTCTTAATAATTAGGCATCAAAAAAGACCATGACATTGTTAATTGTCATGGT CTTTTAAGGTTTAGTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MDDQKWLIEQIEQLRQSASDYREQSFYLGLKDFVQEQSKRIDQTQRELDGRMWE
Sequences:
>Translated_54_residues MDDQKWLIEQIEQLRQSASDYREQSFYLGLKDFVQEQSKRIDQTQRELDGRMWE >Mature_54_residues MDDQKWLIEQIEQLRQSASDYREQSFYLGLKDFVQEQSKRIDQTQRELDGRMWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6696; Mature: 6696
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDQKWLIEQIEQLRQSASDYREQSFYLGLKDFVQEQSKRIDQTQRELDGRMWE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDDQKWLIEQIEQLRQSASDYREQSFYLGLKDFVQEQSKRIDQTQRELDGRMWE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA