Click here to switch to the map view.

The map label for this gene is arcA

Identifier: 116493357

GI number: 116493357

Start: 1611905

End: 1613128

Strand: Reverse

Name: arcA

Synonym: PEPE_1629

Alternate gene names: 116493357

Gene position: 1613128-1611905 (Counterclockwise)

Preceding gene: 116493358

Following gene: 116493356

Centisome position: 88.03

GC content: 38.32

Gene sequence:

>1224_bases
GTGGCGAACGCAATTCATGTAACTTCAGAAATCGGAAAACTTAAGACAGTTATGTTACATCGTCCGGGTAAAGAAATTGA
AAATATTACCCCGGATTCGATGGAAAGATTATTGTTTGATGATATTCCATATCTACCAATCGCTCAAAAAGAACATGACT
TTTTTGCTAAGACCTTGACAGATCAAGGGATTGAAGTGATTTATTTTGAAAAATTGGCAGCTGATGCTTTAAGTGACGAT
GGAGTAAGAAAAGAATTCTTAAATAGAATGATTGCTGAATCTGGCTATGCAGTTGGAGTAATCCATGACGCTTTAATGGA
ATATCTTTACGCAATGGATCCTCAGATGATGATTAATCAAATTATTGAAGGGGTACGAGCAAGCGATGTTAATATTGTTA
CTCCTGACTTACAATCCGTTTCTGAGAATACAGATTGGCCCTTCTTAATGGACCCAATGCCTAACGCATACTTTACTCGC
GATCCCCAAGCATCAATTGGAGATGGGTTATCTATCAACAAGATGACTTTTGAAGCACGCATGCGGGAGTCCTTAATTAC
CGAATATATCATGAACTACAATCCTCGCTTTGCTGGAAAAGTCAAGGTATGGCGAGACCGTAATCATCGTACCCATATTG
AAGGTGGGGATGAATTAGTTTTAAATGATCATGTATTAGCAATTGGTATCTCTCAACGTACGACAGCGAATGCAATTGAA
GATATCGCTCGTAATTTATTCAAAGATTCTAATTATGACACGATTATTGCAATTTCAATACCTCATAATCATGCAATGAT
GCATTTGGATACAGTATTTACGATGATTAATTATGAACAATTTACAGTACATCCAGCAATTTTAACTGGTGATGGAAAAG
TTGATAACTGGGTACTTCATCCTGGTAAAGATGGTGAGATTACAATGGAACATCATACAGACATTAAGGAAGTCTTGAAG
AAGGCTCTTAATAAGTCTGAAATTGACTTAATTCCAACTGGTAATGGTGATCCAATTGTGGCTCCAAGAGAACAATGGAA
TGATGGTTCAAATACGTTATCAATCGCTCCTGGCGTTGTTGTAACTTACGACAGAAATTACGTATCGAACGACTTACTAC
GTCAACACGGTATTCTGGTCCATGAGGTTCGTTCAAGTGAATTATCTCGCGGACGTGGCGGTCCACGGTGCATGTCCTGC
CCAATTGTTCGTGAAGACATCTAA

Upstream 100 bases:

>100_bases
TTGGATGACGCTTTGAAAGGTAATTTAGGTACAGTAATTCACGGCTAAATAATTTATTTAAGTACCAGGTAGAAAAAATA
AGAATAGGAGTGTGATTATA

Downstream 100 bases:

>100_bases
AAATAATTTTATGGCAGAAGTGAACTGTGGTACTAGAAAATAGTAGACAGTTTACTTTTGCCATTTTTATTAAATTTAAG
AATGGAGTGAAGAACATGGA

Product: arginine deiminase

Products: NA

Alternate protein names: ADI; Arginine dihydrolase; AD

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MANAIHVTSEIGKLKTVMLHRPGKEIENITPDSMERLLFDDIPYLPIAQKEHDFFAKTLTDQGIEVIYFEKLAADALSDD
GVRKEFLNRMIAESGYAVGVIHDALMEYLYAMDPQMMINQIIEGVRASDVNIVTPDLQSVSENTDWPFLMDPMPNAYFTR
DPQASIGDGLSINKMTFEARMRESLITEYIMNYNPRFAGKVKVWRDRNHRTHIEGGDELVLNDHVLAIGISQRTTANAIE
DIARNLFKDSNYDTIIAISIPHNHAMMHLDTVFTMINYEQFTVHPAILTGDGKVDNWVLHPGKDGEITMEHHTDIKEVLK
KALNKSEIDLIPTGNGDPIVAPREQWNDGSNTLSIAPGVVVTYDRNYVSNDLLRQHGILVHEVRSSELSRGRGGPRCMSC
PIVREDI

Sequences:

>Translated_407_residues
MANAIHVTSEIGKLKTVMLHRPGKEIENITPDSMERLLFDDIPYLPIAQKEHDFFAKTLTDQGIEVIYFEKLAADALSDD
GVRKEFLNRMIAESGYAVGVIHDALMEYLYAMDPQMMINQIIEGVRASDVNIVTPDLQSVSENTDWPFLMDPMPNAYFTR
DPQASIGDGLSINKMTFEARMRESLITEYIMNYNPRFAGKVKVWRDRNHRTHIEGGDELVLNDHVLAIGISQRTTANAIE
DIARNLFKDSNYDTIIAISIPHNHAMMHLDTVFTMINYEQFTVHPAILTGDGKVDNWVLHPGKDGEITMEHHTDIKEVLK
KALNKSEIDLIPTGNGDPIVAPREQWNDGSNTLSIAPGVVVTYDRNYVSNDLLRQHGILVHEVRSSELSRGRGGPRCMSC
PIVREDI
>Mature_406_residues
ANAIHVTSEIGKLKTVMLHRPGKEIENITPDSMERLLFDDIPYLPIAQKEHDFFAKTLTDQGIEVIYFEKLAADALSDDG
VRKEFLNRMIAESGYAVGVIHDALMEYLYAMDPQMMINQIIEGVRASDVNIVTPDLQSVSENTDWPFLMDPMPNAYFTRD
PQASIGDGLSINKMTFEARMRESLITEYIMNYNPRFAGKVKVWRDRNHRTHIEGGDELVLNDHVLAIGISQRTTANAIED
IARNLFKDSNYDTIIAISIPHNHAMMHLDTVFTMINYEQFTVHPAILTGDGKVDNWVLHPGKDGEITMEHHTDIKEVLKK
ALNKSEIDLIPTGNGDPIVAPREQWNDGSNTLSIAPGVVVTYDRNYVSNDLLRQHGILVHEVRSSELSRGRGGPRCMSCP
IVREDI

Specific function: Unknown

COG id: COG2235

COG function: function code E; Arginine deiminase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginine deiminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARCA_PEDPA (Q03DS2)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_805092.1
- ProteinModelPortal:   Q03DS2
- SMR:   Q03DS2
- STRING:   Q03DS2
- GeneID:   4417483
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_1629
- NMPDR:   fig|278197.10.peg.1435
- eggNOG:   COG2235
- HOGENOM:   HBG298398
- OMA:   EEHDQFA
- PhylomeDB:   Q03DS2
- ProtClustDB:   PRK01388
- BioCyc:   PPEN278197:PEPE_1629-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00242
- InterPro:   IPR003198
- InterPro:   IPR003876
- PIRSF:   PIRSF006356
- PRINTS:   PR01466
- TIGRFAMs:   TIGR01078

Pfam domain/function: PF02274 Amidinotransf

EC number: =3.5.3.6

Molecular weight: Translated: 45911; Mature: 45780

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: ACT_SITE 397-397

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANAIHVTSEIGKLKTVMLHRPGKEIENITPDSMERLLFDDIPYLPIAQKEHDFFAKTLT
CCCEEEEHHHHHHEEEEEEECCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
DQGIEVIYFEKLAADALSDDGVRKEFLNRMIAESGYAVGVIHDALMEYLYAMDPQMMINQ
CCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCHHHHHHH
IIEGVRASDVNIVTPDLQSVSENTDWPFLMDPMPNAYFTRDPQASIGDGLSINKMTFEAR
HHHCCCCCCCEEECCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHH
MRESLITEYIMNYNPRFAGKVKVWRDRNHRTHIEGGDELVLNDHVLAIGISQRTTANAIE
HHHHHHHHHHHCCCCCCCCEEEEEECCCCEEECCCCCEEEEECEEEEEECCCCCHHHHHH
DIARNLFKDSNYDTIIAISIPHNHAMMHLDTVFTMINYEQFTVHPAILTGDGKVDNWVLH
HHHHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHCCEEEEEEEEEEECCCCCCCEEEC
PGKDGEITMEHHTDIKEVLKKALNKSEIDLIPTGNGDPIVAPREQWNDGSNTLSIAPGVV
CCCCCCEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCEECCHHHCCCCCCEEEECCCEE
VTYDRNYVSNDLLRQHGILVHEVRSSELSRGRGGPRCMSCPIVREDI
EEECCCHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCEEECCCHHCCC
>Mature Secondary Structure 
ANAIHVTSEIGKLKTVMLHRPGKEIENITPDSMERLLFDDIPYLPIAQKEHDFFAKTLT
CCEEEEHHHHHHEEEEEEECCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
DQGIEVIYFEKLAADALSDDGVRKEFLNRMIAESGYAVGVIHDALMEYLYAMDPQMMINQ
CCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCHHHHHHH
IIEGVRASDVNIVTPDLQSVSENTDWPFLMDPMPNAYFTRDPQASIGDGLSINKMTFEAR
HHHCCCCCCCEEECCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHH
MRESLITEYIMNYNPRFAGKVKVWRDRNHRTHIEGGDELVLNDHVLAIGISQRTTANAIE
HHHHHHHHHHHCCCCCCCCEEEEEECCCCEEECCCCCEEEEECEEEEEECCCCCHHHHHH
DIARNLFKDSNYDTIIAISIPHNHAMMHLDTVFTMINYEQFTVHPAILTGDGKVDNWVLH
HHHHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHCCEEEEEEEEEEECCCCCCCEEEC
PGKDGEITMEHHTDIKEVLKKALNKSEIDLIPTGNGDPIVAPREQWNDGSNTLSIAPGVV
CCCCCCEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCEECCHHHCCCCCCEEEECCCEE
VTYDRNYVSNDLLRQHGILVHEVRSSELSRGRGGPRCMSCPIVREDI
EEECCCHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA