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The map label for this gene is yfcC [C]

Identifier: 116493354

GI number: 116493354

Start: 1606891

End: 1608432

Strand: Reverse

Name: yfcC [C]

Synonym: PEPE_1626

Alternate gene names: 116493354

Gene position: 1608432-1606891 (Counterclockwise)

Preceding gene: 116493355

Following gene: 116493349

Centisome position: 87.78

GC content: 37.81

Gene sequence:

>1542_bases
ATGACCAGTAAAGCTAAAAGACGTTTTAAGTTAAAAATGCCCGGGACCTTTGTAATTTTATTTATTTTAACAATTGTAGC
AGTTATTGCGACATGGACAGTCCCTTCTGGTAGTTATGCTAAGTTAGCCTATAATCAGACTACTTCAAGTTTGCAGGTTA
AAGATCCTGGGGGCAAGGTTCATAAGGTACCTGCCACTCAAAAGGAATTAAATAAGTTGGGAGTTAAGATTAATATAAAA
AAATTTACTTCAGGAGGGATTACGCAAGAAATTTCGATTCCCAATACATATCAGCGTTTGAAGCAACATCCAGCTAGTAT
TACTAAAGTGACTACGAGTATGGTACGTGGAACAATTGAAGCTGTAGACATTATGGTATTCATCTTTGTCTTAGGCGGGT
TGATTGGGGTTGTTAGGGCTAGTGGAGCATTTGAATCAGGACTGGTTGCTTTAACCAAGAAAACTAAAGGTCATGAATTT
TTATTAATTTTTTTGGTAGCAATTTTGATGATATTAGGTGGAACGTTGTGTGGGATTGAAGAAGAGGCCGTAGCTTTTTA
TCCAATTTTAGTGCCGGTATTCATTGCAATGGGATATGATTCCATAGTATGTGTAGGAGCAATCTTTTTAGCAAGTTCGA
TTGGAACAGCATTTTCAACGATTAATCCGTTTTCAGTCGTAATTGCATCGAATGCGGCGGGAATTAATTTTACAGAAGGA
ATTGGATGGCGTGTGTTTGGATGCATAGTGGCAGCTATTTTTGTTGTAGGTTATTTATACTGGTATAGTCGAAAAGTTAA
GGACAACCCTCAGTTTTCATATTCGTATGAAGATCGTAACACGTTCAATAGTAAGTGGTCGGTTGAAAGTACTGATGACA
GTGAGGCAAGTTTTACTAAACGGAAGAAAATTATTTTATTGTTATTCGTTGCCGGATTTCCACTGATGGTGTGGGGGGTA
ATGACGCAGGGATGGTGGTTTCCAACCATGGCGTCTTCGTTCTTAGCATTTGCGATTATTATCATGTTTCTGACTGGTAC
AGGAGCAAATGGTATTGGTGAAAAAGGCGTTGTAGATGCGTTTGTTAATGGAGCATCTAGTTTGGTAGGAGTTTCTTTGA
TTATTGGGCTAGCACGTGGAATTAACCTTATTTTAAATGAGGGGATGATCTCTGATACAATTCTAGATTTCTCTTCAGCT
CTAGTAGCTAACATGAGTGGTCCAATATTTATTATTGTGATGTTATTGATTTATTTTGTATTGGGATTCATTGTTCCGTC
TTCTTCTGGATTAGCAGTCTTATCGATGCCGATTTTGGCCCCTTTGGCTGATACAGTTGAAATACCAAGATTTGTGGTAG
TAACAGCATACCAATTTGGTCAATATGCAATGTTATTCTTAGCACCAACTGGATTAGTAATGGCGACGTTGCAAATGTTA
GACATGCAGTATTCACACTGGTTAAGATTTGTATGGCCTGTGGTGGTCTTCTTATTAGTATTTGGCGGAGGAATCCTAGT
AGCACAAGTTTTAATATATTAA

Upstream 100 bases:

>100_bases
ATGGCCTGAAGCGTTTTAAGTTTAGAAAGTTTAACTTCCAAAATGGTGTCTGACGCTTAAGGCCATATTTTATATCCACA
TAAAATATGAGGTGATAAAA

Downstream 100 bases:

>100_bases
AAAATAAAAACACCGGAATTTAAATTCCGGTGTTTTGCTGCTTTAATATTAAGCATAAAGGGTAAAAAGGGTCGATGAAT
TATAAAGTGTTAATTGTTAA

Product: C4-dicarboxylate anaerobic carrier dcuC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 512

Protein sequence:

>513_residues
MTSKAKRRFKLKMPGTFVILFILTIVAVIATWTVPSGSYAKLAYNQTTSSLQVKDPGGKVHKVPATQKELNKLGVKINIK
KFTSGGITQEISIPNTYQRLKQHPASITKVTTSMVRGTIEAVDIMVFIFVLGGLIGVVRASGAFESGLVALTKKTKGHEF
LLIFLVAILMILGGTLCGIEEEAVAFYPILVPVFIAMGYDSIVCVGAIFLASSIGTAFSTINPFSVVIASNAAGINFTEG
IGWRVFGCIVAAIFVVGYLYWYSRKVKDNPQFSYSYEDRNTFNSKWSVESTDDSEASFTKRKKIILLLFVAGFPLMVWGV
MTQGWWFPTMASSFLAFAIIIMFLTGTGANGIGEKGVVDAFVNGASSLVGVSLIIGLARGINLILNEGMISDTILDFSSA
LVANMSGPIFIIVMLLIYFVLGFIVPSSSGLAVLSMPILAPLADTVEIPRFVVVTAYQFGQYAMLFLAPTGLVMATLQML
DMQYSHWLRFVWPVVVFLLVFGGGILVAQVLIY

Sequences:

>Translated_513_residues
MTSKAKRRFKLKMPGTFVILFILTIVAVIATWTVPSGSYAKLAYNQTTSSLQVKDPGGKVHKVPATQKELNKLGVKINIK
KFTSGGITQEISIPNTYQRLKQHPASITKVTTSMVRGTIEAVDIMVFIFVLGGLIGVVRASGAFESGLVALTKKTKGHEF
LLIFLVAILMILGGTLCGIEEEAVAFYPILVPVFIAMGYDSIVCVGAIFLASSIGTAFSTINPFSVVIASNAAGINFTEG
IGWRVFGCIVAAIFVVGYLYWYSRKVKDNPQFSYSYEDRNTFNSKWSVESTDDSEASFTKRKKIILLLFVAGFPLMVWGV
MTQGWWFPTMASSFLAFAIIIMFLTGTGANGIGEKGVVDAFVNGASSLVGVSLIIGLARGINLILNEGMISDTILDFSSA
LVANMSGPIFIIVMLLIYFVLGFIVPSSSGLAVLSMPILAPLADTVEIPRFVVVTAYQFGQYAMLFLAPTGLVMATLQML
DMQYSHWLRFVWPVVVFLLVFGGGILVAQVLIY
>Mature_512_residues
TSKAKRRFKLKMPGTFVILFILTIVAVIATWTVPSGSYAKLAYNQTTSSLQVKDPGGKVHKVPATQKELNKLGVKINIKK
FTSGGITQEISIPNTYQRLKQHPASITKVTTSMVRGTIEAVDIMVFIFVLGGLIGVVRASGAFESGLVALTKKTKGHEFL
LIFLVAILMILGGTLCGIEEEAVAFYPILVPVFIAMGYDSIVCVGAIFLASSIGTAFSTINPFSVVIASNAAGINFTEGI
GWRVFGCIVAAIFVVGYLYWYSRKVKDNPQFSYSYEDRNTFNSKWSVESTDDSEASFTKRKKIILLLFVAGFPLMVWGVM
TQGWWFPTMASSFLAFAIIIMFLTGTGANGIGEKGVVDAFVNGASSLVGVSLIIGLARGINLILNEGMISDTILDFSSAL
VANMSGPIFIIVMLLIYFVLGFIVPSSSGLAVLSMPILAPLADTVEIPRFVVVTAYQFGQYAMLFLAPTGLVMATLQMLD
MQYSHWLRFVWPVVVFLLVFGGGILVAQVLIY

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=499, Percent_Identity=31.8637274549098, Blast_Score=222, Evalue=4e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 55650; Mature: 55519

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKAKRRFKLKMPGTFVILFILTIVAVIATWTVPSGSYAKLAYNQTTSSLQVKDPGGKV
CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCE
HKVPATQKELNKLGVKINIKKFTSGGITQEISIPNTYQRLKQHPASITKVTTSMVRGTIE
EECCCCHHHHHHCCCEEEEEEECCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHH
AVDIMVFIFVLGGLIGVVRASGAFESGLVALTKKTKGHEFLLIFLVAILMILGGTLCGIE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
EEAVAFYPILVPVFIAMGYDSIVCVGAIFLASSIGTAFSTINPFSVVIASNAAGINFTEG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
IGWRVFGCIVAAIFVVGYLYWYSRKVKDNPQFSYSYEDRNTFNSKWSVESTDDSEASFTK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHH
RKKIILLLFVAGFPLMVWGVMTQGWWFPTMASSFLAFAIIIMFLTGTGANGIGEKGVVDA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FVNGASSLVGVSLIIGLARGINLILNEGMISDTILDFSSALVANMSGPIFIIVMLLIYFV
HHCCHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LGFIVPSSSGLAVLSMPILAPLADTVEIPRFVVVTAYQFGQYAMLFLAPTGLVMATLQML
HHHHCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEHHHCCEEEEEECHHHHHHHHHHHH
DMQYSHWLRFVWPVVVFLLVFGGGILVAQVLIY
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
>Mature Secondary Structure 
TSKAKRRFKLKMPGTFVILFILTIVAVIATWTVPSGSYAKLAYNQTTSSLQVKDPGGKV
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCE
HKVPATQKELNKLGVKINIKKFTSGGITQEISIPNTYQRLKQHPASITKVTTSMVRGTIE
EECCCCHHHHHHCCCEEEEEEECCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHH
AVDIMVFIFVLGGLIGVVRASGAFESGLVALTKKTKGHEFLLIFLVAILMILGGTLCGIE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
EEAVAFYPILVPVFIAMGYDSIVCVGAIFLASSIGTAFSTINPFSVVIASNAAGINFTEG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
IGWRVFGCIVAAIFVVGYLYWYSRKVKDNPQFSYSYEDRNTFNSKWSVESTDDSEASFTK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHH
RKKIILLLFVAGFPLMVWGVMTQGWWFPTMASSFLAFAIIIMFLTGTGANGIGEKGVVDA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FVNGASSLVGVSLIIGLARGINLILNEGMISDTILDFSSALVANMSGPIFIIVMLLIYFV
HHCCHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LGFIVPSSSGLAVLSMPILAPLADTVEIPRFVVVTAYQFGQYAMLFLAPTGLVMATLQML
HHHHCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEHHHCCEEEEEECHHHHHHHHHHHH
DMQYSHWLRFVWPVVVFLLVFGGGILVAQVLIY
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]