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The map label for this gene is 116493322

Identifier: 116493322

GI number: 116493322

Start: 1562491

End: 1562949

Strand: Reverse

Name: 116493322

Synonym: PEPE_1594

Alternate gene names: NA

Gene position: 1562949-1562491 (Counterclockwise)

Preceding gene: 116493325

Following gene: 116493321

Centisome position: 85.3

GC content: 36.17

Gene sequence:

>459_bases
ATGGAAAACCCCGCGGGTCGCCTAGCAGTGGTAAAGAAAATAATTGATAGCGAAGCTATGTTACTTAGTATCGGTGATGT
GGCCAATGCTGTCGATGTATCAACTAGACAATTACGTTATTGGGAGAAAAAAGGTTATATTGAGTCTAAAATTTCAAAAA
CAGGTCAACGAAAATATACCTATTTTACGATGATTCAAGCTGGTAATATTGCTAGCTATATTGAAGATGGTTTTACTTTA
GCCAAAGCAGCTGAAAAAGCGCAAAGTAACGGACGCATTATGAAAGCGTTACGTCACTTTCTTAAAGAACGTTTTAGTGG
TGGTCGTGAGATTCCTAATGGCTATGAATTTGACTTAGGTGAAATTAAGGGTTTACCAAAAGATCAACGTTTGTTTATCG
AAGTGCTAGAAGATGGGGAAAGTTTTTTTCAAGTTAAAAAAGAAAGTACAAATGATTGA

Upstream 100 bases:

>100_bases
CATAACATCTTTGTCAACTTGTTTGACAAAGATGTTAGAGAAGTTATAATTAGTTTAAAAGATGCAACAAGATATACAGC
ATTAATGAGGAGGAGCAAAC

Downstream 100 bases:

>100_bases
CGAATAAGCTATTTGTACTATATATTTATTAATGAAATACTTACAAAAAAATAACGGTTCATCTTCAAGGGGCAGGGTGC
GATTCCCGACCGGTGGTAAA

Product: transcriptional regulator

Products: NA

Alternate protein names: MerR Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator Family Protein

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MENPAGRLAVVKKIIDSEAMLLSIGDVANAVDVSTRQLRYWEKKGYIESKISKTGQRKYTYFTMIQAGNIASYIEDGFTL
AKAAEKAQSNGRIMKALRHFLKERFSGGREIPNGYEFDLGEIKGLPKDQRLFIEVLEDGESFFQVKKESTND

Sequences:

>Translated_152_residues
MENPAGRLAVVKKIIDSEAMLLSIGDVANAVDVSTRQLRYWEKKGYIESKISKTGQRKYTYFTMIQAGNIASYIEDGFTL
AKAAEKAQSNGRIMKALRHFLKERFSGGREIPNGYEFDLGEIKGLPKDQRLFIEVLEDGESFFQVKKESTND
>Mature_152_residues
MENPAGRLAVVKKIIDSEAMLLSIGDVANAVDVSTRQLRYWEKKGYIESKISKTGQRKYTYFTMIQAGNIASYIEDGFTL
AKAAEKAQSNGRIMKALRHFLKERFSGGREIPNGYEFDLGEIKGLPKDQRLFIEVLEDGESFFQVKKESTND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17193; Mature: 17193

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENPAGRLAVVKKIIDSEAMLLSIGDVANAVDVSTRQLRYWEKKGYIESKISKTGQRKYT
CCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEE
YFTMIQAGNIASYIEDGFTLAKAAEKAQSNGRIMKALRHFLKERFSGGREIPNGYEFDLG
EEEEEECCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
EIKGLPKDQRLFIEVLEDGESFFQVKKESTND
HHCCCCCHHHHHHHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure
MENPAGRLAVVKKIIDSEAMLLSIGDVANAVDVSTRQLRYWEKKGYIESKISKTGQRKYT
CCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEE
YFTMIQAGNIASYIEDGFTLAKAAEKAQSNGRIMKALRHFLKERFSGGREIPNGYEFDLG
EEEEEECCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
EIKGLPKDQRLFIEVLEDGESFFQVKKESTND
HHCCCCCHHHHHHHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA