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The map label for this gene is 116493325

Identifier: 116493325

GI number: 116493325

Start: 1565391

End: 1567073

Strand: Reverse

Name: 116493325

Synonym: PEPE_1597

Alternate gene names: NA

Gene position: 1567073-1565391 (Counterclockwise)

Preceding gene: 116493326

Following gene: 116493322

Centisome position: 85.52

GC content: 32.5

Gene sequence:

>1683_bases
ATGGAAGGCTATATTACAACTGAAAACTATCGCGCATCTACCAAAATGAGTAATAGTAAACCTGAAAATTTGGATTGTTT
GAAGATACCTCGCAATAGTACAGGAGCTTTCCAATTATTATTTCATGACGGGAAGACCAATCAAATTGTATTAAACCAGC
AATTTGTATTACCGAATAATCTAAATGTTAATACGTATCGAGTGGACATTGAAAGTGATTTAAAAGTATCAGCTCACCTC
GTAGACTATTATCAGGATGAACAAGGTGTTTATTATGCGGATAAAATTTTAGAGGAGAAGGAAAAAACTTACACTGGGGA
TCGAATGGCACCAATCTATGTTGAAATTCCTATTGATCAGGAACAGAAACCAGACAAATATAAAGTTAAAATAAGATTGA
TGTTTGCTCCATTAATTGGTTCTGAAAAATGTATTTTGGAAAAAGAATTAATAGTTAGGGTTTTAGATTATACTTTACCT
CAGAAAATCACCAAGGATTTTAATCTGAATATCTGGCAGCAACCTTCTAATTTAGCTCGAACTTTCGGCGTAGAACCTTG
GGGTCAGAAGCATAGACAACTAATTAAAGAAATGGCACAGAGTTTATCAAATTTAGGACAAAAGGCTGTTACGGTGATTG
GTTCTGAGATTCCTTGGAAAGGGTGGTTTAGTTATATAGTTAAAGATTACCCAGCTAATTTATTTGAATACTCGATGATT
CAGATTCATAAAAATAAAAAAGGAAATATCGAATGTGATTTTACGCAACTAGATCAATACTTAGATATTATGATGTCGGC
CGGAATCAATCAAGAAATTGATTTATTTGGATGGTTAGGGGTATGGCAAGCACCATTTTTCCCTGATGTTAAAGGACTAG
ACTATCCTGAGCCAATCATTCTTCGATATTTAGATGATGAATGTCAAGAATTTGCTTATCTAAATACAAAAGAACAGTTA
GAACAATATTTTAAACAAGTTGTCACGCATCTAAAAGAAATTGGAGTATGGACCAAGACATATATTGTCGCAGATGAACC
AAAAGTTAATGCTCTAGATGTTTTTAAAAAGTCAATTAAAGAATTGAAGAAGATTATTCCTGACGCAAAGCTTAAAGTTA
CTTTTGATAAAGAAAAAGCATTAGAAGCGTTATCTTCGGATATAGATTATTTAGTTACATCTTTTAATTGTACATGTCAG
CATCCAGAATTAAATAGCAATCAATTTTATGTTTGTAATTATCCAGATAAACCAAATACTTTCTTGAGTAGTGATTTACT
AGAAACACGACTTTTACCAATTTTAGCTTATTGGACTAGGACAGATGGATTGTTACGGTGGGCCTATAATTGTTGGCCTG
AAAATGCGATAACAGACATAAGGTACAATACCAATAATTTGCCGACTGGCGATTTATGTTTAGTATATCCAAGTACATCG
GGACATTTACTACCTTCACTAAGGTTAAAACAATTATATCGAGGAATTGAAGACTTTTCTTTATTAAAGAAAGCGGAACA
AATAAATTATGAAAAAACGCAAGAGTTAGTGGTAGAATTATTGCACGAAGAAGATCCAAAAAAATGGATGCAAGACAGCC
ATTTAAGTCGATTAGATTTATTCAGAACAACCGATGAACAGTTTAAAAAGTTTCGTCAAGCTTTGTTAAAAATAATTGAA
TAA

Upstream 100 bases:

>100_bases
GTTCCATTCTTTAAAGTTGCTGATAATCATGAATATGAAATAGAACAAGCTAATGCTGAAAAATAGAAAATTAGTTTAGA
AATAAGCAAGGAGAATGGAT

Downstream 100 bases:

>100_bases
CAAAAAACACGTTGAACTTCAAAAGTTCAGCGTGTTTTTATTAGTTGTAATTATTTCTTAGCTTCTTCAATCATCTTCTG
CATCATTTGAGCTTGATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MEGYITTENYRASTKMSNSKPENLDCLKIPRNSTGAFQLLFHDGKTNQIVLNQQFVLPNNLNVNTYRVDIESDLKVSAHL
VDYYQDEQGVYYADKILEEKEKTYTGDRMAPIYVEIPIDQEQKPDKYKVKIRLMFAPLIGSEKCILEKELIVRVLDYTLP
QKITKDFNLNIWQQPSNLARTFGVEPWGQKHRQLIKEMAQSLSNLGQKAVTVIGSEIPWKGWFSYIVKDYPANLFEYSMI
QIHKNKKGNIECDFTQLDQYLDIMMSAGINQEIDLFGWLGVWQAPFFPDVKGLDYPEPIILRYLDDECQEFAYLNTKEQL
EQYFKQVVTHLKEIGVWTKTYIVADEPKVNALDVFKKSIKELKKIIPDAKLKVTFDKEKALEALSSDIDYLVTSFNCTCQ
HPELNSNQFYVCNYPDKPNTFLSSDLLETRLLPILAYWTRTDGLLRWAYNCWPENAITDIRYNTNNLPTGDLCLVYPSTS
GHLLPSLRLKQLYRGIEDFSLLKKAEQINYEKTQELVVELLHEEDPKKWMQDSHLSRLDLFRTTDEQFKKFRQALLKIIE

Sequences:

>Translated_560_residues
MEGYITTENYRASTKMSNSKPENLDCLKIPRNSTGAFQLLFHDGKTNQIVLNQQFVLPNNLNVNTYRVDIESDLKVSAHL
VDYYQDEQGVYYADKILEEKEKTYTGDRMAPIYVEIPIDQEQKPDKYKVKIRLMFAPLIGSEKCILEKELIVRVLDYTLP
QKITKDFNLNIWQQPSNLARTFGVEPWGQKHRQLIKEMAQSLSNLGQKAVTVIGSEIPWKGWFSYIVKDYPANLFEYSMI
QIHKNKKGNIECDFTQLDQYLDIMMSAGINQEIDLFGWLGVWQAPFFPDVKGLDYPEPIILRYLDDECQEFAYLNTKEQL
EQYFKQVVTHLKEIGVWTKTYIVADEPKVNALDVFKKSIKELKKIIPDAKLKVTFDKEKALEALSSDIDYLVTSFNCTCQ
HPELNSNQFYVCNYPDKPNTFLSSDLLETRLLPILAYWTRTDGLLRWAYNCWPENAITDIRYNTNNLPTGDLCLVYPSTS
GHLLPSLRLKQLYRGIEDFSLLKKAEQINYEKTQELVVELLHEEDPKKWMQDSHLSRLDLFRTTDEQFKKFRQALLKIIE
>Mature_560_residues
MEGYITTENYRASTKMSNSKPENLDCLKIPRNSTGAFQLLFHDGKTNQIVLNQQFVLPNNLNVNTYRVDIESDLKVSAHL
VDYYQDEQGVYYADKILEEKEKTYTGDRMAPIYVEIPIDQEQKPDKYKVKIRLMFAPLIGSEKCILEKELIVRVLDYTLP
QKITKDFNLNIWQQPSNLARTFGVEPWGQKHRQLIKEMAQSLSNLGQKAVTVIGSEIPWKGWFSYIVKDYPANLFEYSMI
QIHKNKKGNIECDFTQLDQYLDIMMSAGINQEIDLFGWLGVWQAPFFPDVKGLDYPEPIILRYLDDECQEFAYLNTKEQL
EQYFKQVVTHLKEIGVWTKTYIVADEPKVNALDVFKKSIKELKKIIPDAKLKVTFDKEKALEALSSDIDYLVTSFNCTCQ
HPELNSNQFYVCNYPDKPNTFLSSDLLETRLLPILAYWTRTDGLLRWAYNCWPENAITDIRYNTNNLPTGDLCLVYPSTS
GHLLPSLRLKQLYRGIEDFSLLKKAEQINYEKTQELVVELLHEEDPKKWMQDSHLSRLDLFRTTDEQFKKFRQALLKIIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65393; Mature: 65393

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGYITTENYRASTKMSNSKPENLDCLKIPRNSTGAFQLLFHDGKTNQIVLNQQFVLPNN
CCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEECEEECCCC
LNVNTYRVDIESDLKVSAHLVDYYQDEQGVYYADKILEEKEKTYTGDRMAPIYVEIPIDQ
CCCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCC
EQKPDKYKVKIRLMFAPLIGSEKCILEKELIVRVLDYTLPQKITKDFNLNIWQQPSNLAR
CCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHH
TFGVEPWGQKHRQLIKEMAQSLSNLGQKAVTVIGSEIPWKGWFSYIVKDYPANLFEYSMI
HCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHEEEE
QIHKNKKGNIECDFTQLDQYLDIMMSAGINQEIDLFGWLGVWQAPFFPDVKGLDYPEPII
EEECCCCCCEEECHHHHHHHHHHHHHCCCCCCCHHEEEHHHHCCCCCCCCCCCCCCCHHH
LRYLDDECQEFAYLNTKEQLEQYFKQVVTHLKEIGVWTKTYIVADEPKVNALDVFKKSIK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHH
ELKKIIPDAKLKVTFDKEKALEALSSDIDYLVTSFNCTCQHPELNSNQFYVCNYPDKPNT
HHHHHCCCCEEEEEECHHHHHHHHHCCHHHEEEECCCEECCCCCCCCCEEEEECCCCCCC
FLSSDLLETRLLPILAYWTRTDGLLRWAYNCWPENAITDIRYNTNNLPTGDLCLVYPSTS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCC
GHLLPSLRLKQLYRGIEDFSLLKKAEQINYEKTQELVVELLHEEDPKKWMQDSHLSRLDL
CCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHH
FRTTDEQFKKFRQALLKIIE
HHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEGYITTENYRASTKMSNSKPENLDCLKIPRNSTGAFQLLFHDGKTNQIVLNQQFVLPNN
CCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEECEEECCCC
LNVNTYRVDIESDLKVSAHLVDYYQDEQGVYYADKILEEKEKTYTGDRMAPIYVEIPIDQ
CCCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCC
EQKPDKYKVKIRLMFAPLIGSEKCILEKELIVRVLDYTLPQKITKDFNLNIWQQPSNLAR
CCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHH
TFGVEPWGQKHRQLIKEMAQSLSNLGQKAVTVIGSEIPWKGWFSYIVKDYPANLFEYSMI
HCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHEEEE
QIHKNKKGNIECDFTQLDQYLDIMMSAGINQEIDLFGWLGVWQAPFFPDVKGLDYPEPII
EEECCCCCCEEECHHHHHHHHHHHHHCCCCCCCHHEEEHHHHCCCCCCCCCCCCCCCHHH
LRYLDDECQEFAYLNTKEQLEQYFKQVVTHLKEIGVWTKTYIVADEPKVNALDVFKKSIK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHH
ELKKIIPDAKLKVTFDKEKALEALSSDIDYLVTSFNCTCQHPELNSNQFYVCNYPDKPNT
HHHHHCCCCEEEEEECHHHHHHHHHCCHHHEEEECCCEECCCCCCCCCEEEEECCCCCCC
FLSSDLLETRLLPILAYWTRTDGLLRWAYNCWPENAITDIRYNTNNLPTGDLCLVYPSTS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCC
GHLLPSLRLKQLYRGIEDFSLLKKAEQINYEKTQELVVELLHEEDPKKWMQDSHLSRLDL
CCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHH
FRTTDEQFKKFRQALLKIIE
HHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA