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The map label for this gene is hslR [C]

Identifier: 116493278

GI number: 116493278

Start: 1517188

End: 1517457

Strand: Reverse

Name: hslR [C]

Synonym: PEPE_1550

Alternate gene names: 116493278

Gene position: 1517457-1517188 (Counterclockwise)

Preceding gene: 116493279

Following gene: 116493277

Centisome position: 82.81

GC content: 32.22

Gene sequence:

>270_bases
ATGAGATTAGATAAATTTTTAAAGGTTTCAAGAATTATCAAACGGCGTGCTTTAGCTAAGGAAGTAGCTGATCAAGGACG
AATTTTGATCAATGATAAAGTGGCTAAATCTTCAACTAATGTGGGAGTAAACGACCATATTGAAATTCGTTTTGGAAATA
AAACGTTGGTAATTAAAGTTGATCAGCTTTTAGATACTACGAAAAAAGATGATGCAGAACGGATGTACACGATCGTTTCC
GAAAATTACGAACAAGATTTTAGAAAATAA

Upstream 100 bases:

>100_bases
TTATTAGTTATATCTTTAAATTCAGGTTATTTAGTATTCGGGAATGGTTGACTATTCCCTATGGTTCAAAAATTTTAAGA
ATGGTACAGAGGATTGTTAA

Downstream 100 bases:

>100_bases
TTAAGAAGTTAAAAATGATAGACAGTTAAAGAAAGCGTTGTTATAATTTAAGATAATTGAGAGGTTATTTTAATGGAAAA
TGTGAAGAAAAATAAGAGAA

Product: ribosome-associated heat shock protein implicated in the recycling of the 50S subunit S4-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MRLDKFLKVSRIIKRRALAKEVADQGRILINDKVAKSSTNVGVNDHIEIRFGNKTLVIKVDQLLDTTKKDDAERMYTIVS
ENYEQDFRK

Sequences:

>Translated_89_residues
MRLDKFLKVSRIIKRRALAKEVADQGRILINDKVAKSSTNVGVNDHIEIRFGNKTLVIKVDQLLDTTKKDDAERMYTIVS
ENYEQDFRK
>Mature_89_residues
MRLDKFLKVSRIIKRRALAKEVADQGRILINDKVAKSSTNVGVNDHIEIRFGNKTLVIKVDQLLDTTKKDDAERMYTIVS
ENYEQDFRK

Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 10352; Mature: 10352

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDKFLKVSRIIKRRALAKEVADQGRILINDKVAKSSTNVGVNDHIEIRFGNKTLVIKV
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEE
DQLLDTTKKDDAERMYTIVSENYEQDFRK
HHHHCCCCCCCHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure
MRLDKFLKVSRIIKRRALAKEVADQGRILINDKVAKSSTNVGVNDHIEIRFGNKTLVIKV
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEE
DQLLDTTKKDDAERMYTIVSENYEQDFRK
HHHHCCCCCCCHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]